RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-205ENST00000566613 IKBKBO14920 756 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 SYF2O95926 243 aaKnown RBP6.35□□□□□ -1.39
GDPD3-205ENST00000566613 GOLGA6DP0CG33 693 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 ATP5JP18859 108 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 CTHP32929 405 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 MMP16P51512 607 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 IRAK1P51617 712 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 PIP4K2BP78356 416 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 CLDN10P78369 228 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 LMNB2Q03252 620 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 OCLNQ16625 522 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 CCDC57Q2TAC2 916 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 MIS18BP1Q6P0N0 1132 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 CYB5D1Q6P9G0 228 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 MTHFD1LQ6UB35 978 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 ARMCX6Q7L4S7 300 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 UBE3BQ7Z3V4 1068 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 CCDC13Q8IYE1 715 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 AOPEPQ8N6M6 819 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 IGSF22Q8N9C0 903 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 BCAS4Q8TDM0 211 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 DHX58Q96C10 678 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 BICD1Q96G01 975 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 ACSBG1Q96GR2 724 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 RMDN2Q96LZ7 410 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 ZNF396Q96N95 335 aaPredicted RBP6.35□□□□□ -1.39
GDPD3-205ENST00000566613 SH3GL2Q99962 352 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 UPF3BQ9BZI7 483 aaKnown RBP6.35□□□□□ -1.39
GDPD3-205ENST00000566613 TM6SF1Q9BZW5 370 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 KAT14Q9H8E8 782 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 GOLGA6AQ9NYA3 693 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 LMCD1Q9NZU5 365 aa6.35□□□□□ -1.39
GDPD3-205ENST00000566613 XRN1Q8IZH2 1706 aaKnown RBP6.35□□□□□ -1.39
GDPD3-205ENST00000566613 PPLO60437 1756 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 PARP4Q9UKK3 1724 aaKnown RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 MROH2AA6NES4 1674 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 VPS37CA5D8V6 355 aaPredicted RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 PYGLP06737 847 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 EPB41P11171 864 aaKnown RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 ALDH1B1P30837 517 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 TMPOP42166 694 aaKnown RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 PDE1AP54750 535 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 AK2P54819 239 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 SEC13P55735 322 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 GNG11P61952 73 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 VSNL1P62760 191 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 DEUP1Q05D60 604 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 DYNC1I2Q13409 638 aaKnown RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 RASA3Q14644 834 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 CAMK4Q16566 473 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 ACBD5Q5T8D3 534 aaPredicted RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 ATL3Q6DD88 541 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 PRPF40BQ6NWY9 871 aaKnown RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 CCDC73Q6ZRK6 1079 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 TMTC2Q8N394 836 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 GBP7Q8N8V2 638 aaPredicted RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 ADAM32Q8TC27 787 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 COG1Q8WTW3 980 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 LZICQ8WZA0 190 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 WNT2BQ93097 391 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 CNKSR1Q969H4 720 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 RBM17Q96I25 401 aaKnown RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 RPGRIP1Q96KN7 1286 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 SPAG5Q96R06 1193 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 PNKPQ96T60 521 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 TRIM7Q9C029 511 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 LRRCC1Q9C099 1032 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 XPO4Q9C0E2 1151 aaKnown RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 PLEKHA4Q9H4M7 779 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 ANO2Q9NQ90 1003 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 INCENPQ9NQS7 918 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 CXXC1Q9P0U4 656 aaPredicted RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 MYO1AQ9UBC5 1043 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 HOOK1Q9UJC3 728 aaKnown RBP6.34□□□□□ -1.39
GDPD3-205ENST00000566613 MYH8P13535 1937 aa6.34□□□□□ -1.39
GDPD3-205ENST00000566613 PXDNLA1KZ92 1463 aa6.34□□□□□ -1.4
GDPD3-205ENST00000566613 ATP10BO94823 1461 aa6.34□□□□□ -1.4
GDPD3-205ENST00000566613 PRG4Q92954 1404 aaPredicted RBP6.33□□□□□ -1.4
GDPD3-205ENST00000566613 ARHGEF10O15013 1369 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 CTAGE15A4D2H0 777 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 SPDYE3A6NKU9 549 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 LRRIQ3A6PVS8 624 aaPredicted RBP6.33□□□□□ -1.4
GDPD3-205ENST00000566613 NDUFAB1O14561 156 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 MGRN1O60291 552 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 STX10O60499 249 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 ICMTO60725 284 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 DNAJC8O75937 253 aaPredicted RBP6.33□□□□□ -1.4
GDPD3-205ENST00000566613 VIMP08670 466 aaKnown RBP6.33□□□□□ -1.4
GDPD3-205ENST00000566613 CTAGE8P0CG41 777 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 TCF3P15923 654 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 YY1P25490 414 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 PEX19P40855 299 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 PAPOLAP51003 745 aaKnown RBP6.33□□□□□ -1.4
GDPD3-205ENST00000566613 SH3BGRP55822 239 aaPredicted RBP6.33□□□□□ -1.4
GDPD3-205ENST00000566613 GNGT1P63211 74 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 APBA1Q02410 837 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 XRCC4Q13426 336 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 RIPK1Q13546 671 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 STIM1Q13586 685 aa6.33□□□□□ -1.4
GDPD3-205ENST00000566613 CUL3Q13618 768 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms