RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ZSCAN25Q6NSZ9 544 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 LBX2Q6XYB7 198 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 TMEM179Q6ZVK1 233 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 SP7Q8TDD2 431 aaPredicted RBP14.39□□□□□ -0.11
UBR1-206ENST00000566493 C11orf49Q9H6J7 331 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 HOXC10Q9NYD6 342 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 OGDHLQ9ULD0 1010 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 CYP2D6P10635 497 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 PTPREP23469 700 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 COG2Q14746 738 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 CCL14Q16627 93 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 POTEEQ6S8J3 1075 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 TANGO6Q9C0B7 1094 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 SH2D4AQ9H788 454 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 ARHGEF10LQ9HCE6 1279 aa14.38□□□□□ -0.11
UBR1-206ENST00000566493 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
UBR1-206ENST00000566493 CEP290O15078 2479 aa14.37□□□□□ -0.11
UBR1-206ENST00000566493 MYH7P12883 1935 aa14.37□□□□□ -0.11
UBR1-206ENST00000566493 SPDYE16A6NNV3 312 aaPredicted RBP14.37□□□□□ -0.11
UBR1-206ENST00000566493 PRKAB2O43741 272 aa14.37□□□□□ -0.11
UBR1-206ENST00000566493 UBE3CQ15386 1083 aa14.37□□□□□ -0.11
UBR1-206ENST00000566493 C7orf61Q8IZ16 206 aa14.37□□□□□ -0.11
UBR1-206ENST00000566493 SLC44A5Q8NCS7 719 aa14.37□□□□□ -0.11
UBR1-206ENST00000566493 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
UBR1-206ENST00000566493 BTBD7Q9P203 1132 aa14.37□□□□□ -0.11
UBR1-206ENST00000566493 BAZ2AQ9UIF9 1905 aaKnown RBP14.37□□□□□ -0.11
UBR1-206ENST00000566493 A0A1W2PRG0 241 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 CCND3P30281 292 aaPredicted RBP14.36□□□□□ -0.11
UBR1-206ENST00000566493 ATP2B2Q01814 1243 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 SLFNL1Q499Z3 407 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 C20orf194Q5TEA3 1177 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 LPAR1Q92633 364 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 CCDC17Q96LX7 622 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 PRO3102Q9H379 93 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 SLC4A4Q9Y6R1 1079 aa14.36□□□□□ -0.11
UBR1-206ENST00000566493 ALPK3Q96L96 1907 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 A0A1W2PPC1 479 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 USP17L12C9JPN9 530 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 USP17L21D6R901 530 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 SMARCA5O60264 1052 aaPredicted RBP14.35□□□□□ -0.11
UBR1-206ENST00000566493 AKR1B1P15121 316 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 CDK8P49336 464 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
UBR1-206ENST00000566493 ICA1Q05084 483 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 GRB14Q14449 540 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 C12orf60Q5U649 245 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 DPP9Q86TI2 863 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 ECHDC1Q9NTX5 307 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 STAP2Q9UGK3 403 aa14.35□□□□□ -0.11
UBR1-206ENST00000566493 CYP2D7A0A087X1C5 515 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 STRNO43815 780 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 FLOT1O75955 427 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 HOXC6P09630 235 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 CNGA1P29973 690 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 PLS1Q14651 629 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 MB21D1Q8N884 522 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 MOV10L1Q9BXT6 1211 aaKnown RBP14.34□□□□□ -0.11
UBR1-206ENST00000566493 SPATC1LQ9H0A9 340 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 ZMYND8Q9ULU4 1186 aaPredicted RBP14.34□□□□□ -0.11
UBR1-206ENST00000566493 TMX2Q9Y320 296 aa14.34□□□□□ -0.11
UBR1-206ENST00000566493 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 MSCO60682 206 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 LHX8Q68G74 356 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 C16orf86Q6ZW13 317 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 VCPKMTQ9H867 229 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 SLC5A4Q9NY91 659 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 FLRT1Q9NZU1 646 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.12
UBR1-206ENST00000566493 WDR46O15213 610 aaKnown RBP14.32□□□□□ -0.12
UBR1-206ENST00000566493 CHGBP05060 677 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 ERCC3P19447 782 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 KIAA1755Q5JYT7 1200 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 CTR9Q6PD62 1173 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 NCAPG2Q86XI2 1143 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 CLEC10AQ8IUN9 316 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 NPLOC4Q8TAT6 608 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 PUS7LQ9H0K6 701 aaKnown RBP14.32□□□□□ -0.12
UBR1-206ENST00000566493 MROH8Q9H579 483 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 GOPCQ9HD26 462 aa14.32□□□□□ -0.12
UBR1-206ENST00000566493 ARPP21Q9UBL0 812 aaPredicted RBP14.32□□□□□ -0.12
UBR1-206ENST00000566493 DDX20Q9UHI6 824 aaKnown RBP14.32□□□□□ -0.12
UBR1-206ENST00000566493 RAD21O60216 631 aa14.31□□□□□ -0.12
UBR1-206ENST00000566493 COL6A1P12109 1028 aa14.31□□□□□ -0.12
UBR1-206ENST00000566493 EEF2P13639 858 aaKnown RBP14.31□□□□□ -0.12
UBR1-206ENST00000566493 SYN1P17600 705 aa14.31□□□□□ -0.12
UBR1-206ENST00000566493 ADORA2AP29274 412 aa14.31□□□□□ -0.12
UBR1-206ENST00000566493 CYP2C19P33261 490 aa14.31□□□□□ -0.12
UBR1-206ENST00000566493 BMP8BP34820 402 aa14.31□□□□□ -0.12
UBR1-206ENST00000566493 PFASO15067 1338 aa14.31□□□□□ -0.12
UBR1-206ENST00000566493 A0A0G2JMZ2 1700 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 FRMPD3Q5JV73 1810 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 MINDY4BA8MYZ0 360 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms