RNA–Protein interactions for RNA: ENST00000566434.5

GDPD3-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 3

Gene GDPD3, Length 399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-204ENST00000566434 USP17L22D6RA61 530 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 USP17L17D6RBQ6 530 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 USP17L19D6RCP7 530 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 USP17L20D6RJB6 530 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 ECM2O94769 699 aaPredicted RBP15.3■□□□□ 0.04
GDPD3-204ENST00000566434 TTLL1O95922 423 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 FGRP09769 529 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 USP17L24Q0WX57 530 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 KIF22Q14807 665 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 SIAH1Q8IUQ4 282 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 LRRC47Q8N1G4 583 aaKnown RBP15.3■□□□□ 0.04
GDPD3-204ENST00000566434 LPAR1Q92633 364 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 ERO1AQ96HE7 468 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 CNNM2Q9H8M5 875 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 ISY1Q9ULR0 285 aaKnown RBP15.3■□□□□ 0.04
GDPD3-204ENST00000566434 STX8Q9UNK0 236 aa15.3■□□□□ 0.04
GDPD3-204ENST00000566434 ADGRA2Q96PE1 1338 aa15.29■□□□□ 0.04
GDPD3-204ENST00000566434 B4E1Z4 1266 aa15.29■□□□□ 0.04
GDPD3-204ENST00000566434 HOXA7P31268 230 aaPredicted RBP15.29■□□□□ 0.04
GDPD3-204ENST00000566434 TRDNQ13061 729 aa15.29■□□□□ 0.04
GDPD3-204ENST00000566434 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
GDPD3-204ENST00000566434 CD99L2Q8TCZ2 262 aa15.29■□□□□ 0.04
GDPD3-204ENST00000566434 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
GDPD3-204ENST00000566434 KRT23Q9C075 422 aa15.29■□□□□ 0.04
GDPD3-204ENST00000566434 LSG1Q9H089 658 aaKnown RBP15.29■□□□□ 0.04
GDPD3-204ENST00000566434 WDR46O15213 610 aaKnown RBP15.28■□□□□ 0.04
GDPD3-204ENST00000566434 NMT2O60551 498 aa15.28■□□□□ 0.04
GDPD3-204ENST00000566434 KDM4AO75164 1064 aa15.28■□□□□ 0.04
GDPD3-204ENST00000566434 CYP21A2P08686 494 aa15.28■□□□□ 0.04
GDPD3-204ENST00000566434 GCLCP48506 637 aaPredicted RBP15.28■□□□□ 0.04
GDPD3-204ENST00000566434 COL13A1Q5TAT6 717 aaPredicted RBP15.28■□□□□ 0.04
GDPD3-204ENST00000566434 C17orf99Q6UX52 265 aa15.28■□□□□ 0.04
GDPD3-204ENST00000566434 RALYLQ86SE5 291 aaKnown RBP15.28■□□□□ 0.04
GDPD3-204ENST00000566434 ANKRD13CQ8N6S4 541 aa15.28■□□□□ 0.04
GDPD3-204ENST00000566434 NT5C2P49902 561 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 HERVK_113P62684 666 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 ARHGEF6Q15052 776 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 KIAA1755Q5JYT7 1200 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 CATSPERGQ6ZRH7 1159 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 CTU1Q7Z7A3 348 aaKnown RBP15.27■□□□□ 0.04
GDPD3-204ENST00000566434 IQCA1Q86XH1 822 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 GTF3C2Q8WUA4 911 aaPredicted RBP15.27■□□□□ 0.04
GDPD3-204ENST00000566434 P2RX7Q99572 595 aaKnown RBP15.27■□□□□ 0.04
GDPD3-204ENST00000566434 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 IL17RBQ9NRM6 502 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 MTMR7Q9Y216 660 aa15.27■□□□□ 0.04
GDPD3-204ENST00000566434 F5H6K3 240 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 FLOT1O75955 427 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 NDUFB10O96000 172 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 BCRP11274 1271 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 LACTBP83111 547 aaPredicted RBP15.26■□□□□ 0.03
GDPD3-204ENST00000566434 KLRC3Q07444 240 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 FAM83BQ5T0W9 1011 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 RNF20Q5VTR2 975 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 SLFN13Q68D06 897 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 NUP88Q99567 741 aaPredicted RBP15.26■□□□□ 0.03
GDPD3-204ENST00000566434 ZKSCAN3Q9BRR0 538 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 UBAC1Q9BSL1 405 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 SYNPO2Q9UMS6 1093 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 TRIM17Q9Y577 477 aa15.26■□□□□ 0.03
GDPD3-204ENST00000566434 E7EWF7 191 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 REC8O95072 547 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 TOP1P11387 765 aaKnown RBP15.25■□□□□ 0.03
GDPD3-204ENST00000566434 FAM110CQ1W6H9 321 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 CCDC178Q5BJE1 867 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 CCAR1Q8IX12 1150 aaKnown RBP15.25■□□□□ 0.03
GDPD3-204ENST00000566434 GMCL1P1Q8NEA9 526 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 NCOA7Q8NI08 942 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 MKL1Q969V6 931 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 EFCC1Q9HA90 598 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 TCP11L1Q9NUJ3 509 aa15.25■□□□□ 0.03
GDPD3-204ENST00000566434 SLC27A2O14975 620 aa15.24■□□□□ 0.03
GDPD3-204ENST00000566434 FMNL1O95466 1100 aaPredicted RBP15.24■□□□□ 0.03
GDPD3-204ENST00000566434 FCGRTP55899 365 aa15.24■□□□□ 0.03
GDPD3-204ENST00000566434 COG2Q14746 738 aa15.24■□□□□ 0.03
GDPD3-204ENST00000566434 CREB3L3Q68CJ9 461 aa15.24■□□□□ 0.03
GDPD3-204ENST00000566434 TNS4Q8IZW8 715 aa15.24■□□□□ 0.03
GDPD3-204ENST00000566434 GPRC5AQ8NFJ5 357 aa15.24■□□□□ 0.03
GDPD3-204ENST00000566434 ZSCAN10Q96SZ4 725 aaPredicted RBP15.24■□□□□ 0.03
GDPD3-204ENST00000566434 CWC22Q9HCG8 908 aaKnown RBP15.24■□□□□ 0.03
GDPD3-204ENST00000566434 HOXC10Q9NYD6 342 aa15.24■□□□□ 0.03
GDPD3-204ENST00000566434 ZSWIM8A7E2V4 1837 aa15.24■□□□□ 0.03
GDPD3-204ENST00000566434 TNKSO95271 1327 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 SPDYE16A6NNV3 312 aaPredicted RBP15.23■□□□□ 0.03
GDPD3-204ENST00000566434 BMP3P12645 472 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 SLC1A4P43007 532 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 PSMC4P43686 418 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 IKQ13123 557 aaPredicted RBP15.23■□□□□ 0.03
GDPD3-204ENST00000566434 CCDC96Q2M329 555 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 NKX2-3Q8TAU0 364 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 TMEM47Q9BQJ4 181 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 ARHGAP39Q9C0H5 1083 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 FBXO28Q9NVF7 368 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 ZSWIM5Q9P217 1185 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
GDPD3-204ENST00000566434 TAF6LQ9Y6J9 622 aa15.23■□□□□ 0.03
GDPD3-204ENST00000566434 ERICH2A1L162 156 aa15.22■□□□□ 0.03
GDPD3-204ENST00000566434 TNPO2O14787 897 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms