RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 MYH6P13533 1939 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 HMGB2P26583 209 aaKnown RBP10.59□□□□□ -0.71
BBS4-210ENST00000566400 LONP1P36776 959 aaKnown RBP10.59□□□□□ -0.71
BBS4-210ENST00000566400 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 TNFRSF25Q93038 417 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 BAG1Q99933 345 aaPredicted RBP10.59□□□□□ -0.71
BBS4-210ENST00000566400 TCP11L1Q9NUJ3 509 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 RTCBQ9Y3I0 505 aaKnown RBP10.59□□□□□ -0.71
BBS4-210ENST00000566400 UBE2Q2LH0YL09 131 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 LAD1O00515 517 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 BMP6P22004 513 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 SPECC1Q5M775 1068 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 CMTR1Q8N1G2 835 aaKnown RBP10.59□□□□□ -0.71
BBS4-210ENST00000566400 DHX58Q96C10 678 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 CCDC51Q96ER9 411 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 PANX2Q96RD6 677 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 ROBO3Q96MS0 1386 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 MYH13Q9UKX3 1938 aa10.59□□□□□ -0.71
BBS4-210ENST00000566400 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 CCDC88AQ3V6T2 1871 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 A0A1B0GTH6 734 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 ATP2B1P20020 1258 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 TUBB4BP68371 445 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 TRIM14Q14142 442 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 C15orf52Q6ZUT6 534 aaKnown RBP10.58□□□□□ -0.72
BBS4-210ENST00000566400 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 PDILTQ8N807 584 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 CCDC12Q8WUD4 166 aaPredicted RBP10.58□□□□□ -0.72
BBS4-210ENST00000566400 TSC1Q92574 1164 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 SYMPKQ92797 1274 aaKnown RBP10.58□□□□□ -0.72
BBS4-210ENST00000566400 PAGE5Q96GU1 130 aa10.58□□□□□ -0.72
BBS4-210ENST00000566400 ARGLU1Q9NWB6 273 aaPredicted RBP10.58□□□□□ -0.72
BBS4-210ENST00000566400 NPHP1O15259 732 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 KCNQ2O43526 872 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 LDHBP07195 334 aaKnown RBP10.57□□□□□ -0.72
BBS4-210ENST00000566400 USP5P45974 858 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 DPYDQ12882 1025 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 TUBB2AQ13885 445 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 NR1I3Q14994 352 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 SYT10Q6XYQ8 523 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 BICDL1Q6ZP65 573 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 PPFIBP1Q86W92 1011 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 DPF2Q92785 391 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 TUBB2BQ9BVA1 445 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 DNAI1Q9UI46 699 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 USP21Q9UK80 565 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 ZNF215Q9UL58 517 aaPredicted RBP10.57□□□□□ -0.72
BBS4-210ENST00000566400 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.57□□□□□ -0.72
BBS4-210ENST00000566400 ITIH6Q6UXX5 1313 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 CASZ1Q86V15 1759 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 AKR1B15C9JRZ8 316 aaPredicted RBP10.57□□□□□ -0.72
BBS4-210ENST00000566400 FOXN1O15353 648 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 GTPBP6O43824 516 aaPredicted RBP10.57□□□□□ -0.72
BBS4-210ENST00000566400 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 PLCG2P16885 1265 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 PPP4CP60510 307 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 GRIN1Q05586 938 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 PTGDRQ13258 359 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 CCDC93Q567U6 631 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 C12orf60Q5U649 245 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 C3orf67Q6ZVT6 689 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 CNGA4Q8IV77 575 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 BLIDQ8IZY5 108 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 SRBD1Q8N5C6 995 aaKnown RBP10.57□□□□□ -0.72
BBS4-210ENST00000566400 DAGLBQ8NCG7 672 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 MAGEF1Q9HAY2 307 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 MCM9Q9NXL9 1143 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 PCDHA4Q9UN74 947 aa10.57□□□□□ -0.72
BBS4-210ENST00000566400 PRDM1O75626 825 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 SMARCA1P28370 1054 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 HOXA7P31268 230 aaPredicted RBP10.56□□□□□ -0.72
BBS4-210ENST00000566400 PPP1R2P41236 205 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 FAM193AP78312 1265 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 ORC2Q13416 577 aaPredicted RBP10.56□□□□□ -0.72
BBS4-210ENST00000566400 GRAPQ13588 217 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 ZNF444Q8N0Y2 327 aaPredicted RBP10.56□□□□□ -0.72
BBS4-210ENST00000566400 MNS1Q8NEH6 495 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 GRAPLQ8TC17 118 aaPredicted RBP10.56□□□□□ -0.72
BBS4-210ENST00000566400 ZNF384Q8TF68 577 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 CUEDC2Q9H467 287 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 MKNK2Q9HBH9 465 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 PPP2R2CQ9Y2T4 447 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 XDHP47989 1333 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 CCDC194A0A1B0GVG4 234 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 VWA3AA6NCI4 1184 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 GNPATO15228 680 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 CCDC175P0C221 793 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 PRDX5P30044 214 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 FMR1Q06787 632 aaKnown RBP eCLIP10.56□□□□□ -0.72
BBS4-210ENST00000566400 CUL4BQ13620 913 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 GRM4Q14833 912 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 ZNF174Q15697 407 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 NPY5RQ15761 445 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
BBS4-210ENST00000566400 UTP14CQ5TAP6 766 aaKnown RBP10.56□□□□□ -0.72
BBS4-210ENST00000566400 CDKAL1Q5VV42 579 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms