RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ICA1Q05084 483 aa22.02■■□□□ 1.12
USB1-213ENST00000566292 AMOTL1Q8IY63 956 aa22.02■■□□□ 1.12
USB1-213ENST00000566292 TRMT44Q8IYL2 757 aaKnown RBP22.02■■□□□ 1.12
USB1-213ENST00000566292 OSBP2Q969R2 916 aa22.02■■□□□ 1.12
USB1-213ENST00000566292 DDRGK1Q96HY6 314 aa22.02■■□□□ 1.12
USB1-213ENST00000566292 GPATCH3Q96I76 525 aa22.02■■□□□ 1.12
USB1-213ENST00000566292 PAWRQ96IZ0 340 aaKnown RBP22.02■■□□□ 1.12
USB1-213ENST00000566292 CCDC17Q96LX7 622 aa22.02■■□□□ 1.12
USB1-213ENST00000566292 APBA2Q99767 749 aa22.02■■□□□ 1.12
USB1-213ENST00000566292 TMX2Q9Y320 296 aa22.02■■□□□ 1.12
USB1-213ENST00000566292 COL11A1P12107 1806 aaPredicted RBP22.01■■□□□ 1.11
USB1-213ENST00000566292 RRP1P56182 461 aaKnown RBP22.01■■□□□ 1.11
USB1-213ENST00000566292 CACNB2Q08289 660 aaPredicted RBP22.01■■□□□ 1.11
USB1-213ENST00000566292 MAP2K5Q13163 448 aa22.01■■□□□ 1.11
USB1-213ENST00000566292 COG2Q14746 738 aa22.01■■□□□ 1.11
USB1-213ENST00000566292 TANGO6Q9C0B7 1094 aa22.01■■□□□ 1.11
USB1-213ENST00000566292 ARHGEF10LQ9HCE6 1279 aa22.01■■□□□ 1.11
USB1-213ENST00000566292 CWC22Q9HCG8 908 aaKnown RBP22.01■■□□□ 1.11
USB1-213ENST00000566292 GSG1L2A8MUP6 293 aa22■■□□□ 1.11
USB1-213ENST00000566292 PTPREP23469 700 aa22■■□□□ 1.11
USB1-213ENST00000566292 MNX1P50219 401 aaPredicted RBP22■■□□□ 1.11
USB1-213ENST00000566292 WDR78Q5VTH9 848 aa22■■□□□ 1.11
USB1-213ENST00000566292 ANKLE1Q8NAG6 615 aa22■■□□□ 1.11
USB1-213ENST00000566292 APPBP2Q92624 585 aa22■■□□□ 1.11
USB1-213ENST00000566292 ARPP21Q9UBL0 812 aaPredicted RBP22■■□□□ 1.11
USB1-213ENST00000566292 ZNF236Q9UL36 1845 aa21.99■■□□□ 1.11
USB1-213ENST00000566292 SLC15A5A6NIM6 579 aa21.99■■□□□ 1.11
USB1-213ENST00000566292 RNF113AO15541 343 aaKnown RBP21.99■■□□□ 1.11
USB1-213ENST00000566292 GLRX3O76003 335 aaKnown RBP21.99■■□□□ 1.11
USB1-213ENST00000566292 NECAB2Q7Z6G3 386 aa21.99■■□□□ 1.11
USB1-213ENST00000566292 SPICE1Q8N0Z3 855 aa21.99■■□□□ 1.11
USB1-213ENST00000566292 OTUD7AQ8TE49 926 aaPredicted RBP21.99■■□□□ 1.11
USB1-213ENST00000566292 LPAR1Q92633 364 aa21.99■■□□□ 1.11
USB1-213ENST00000566292 VCPKMTQ9H867 229 aa21.99■■□□□ 1.11
USB1-213ENST00000566292 HOXC10Q9NYD6 342 aa21.99■■□□□ 1.11
USB1-213ENST00000566292 CCND3P30281 292 aaPredicted RBP21.98■■□□□ 1.11
USB1-213ENST00000566292 GRB14Q14449 540 aa21.98■■□□□ 1.11
USB1-213ENST00000566292 SBK1Q52WX2 424 aa21.98■■□□□ 1.11
USB1-213ENST00000566292 CHRDL2Q6WN34 429 aa21.98■■□□□ 1.11
USB1-213ENST00000566292 MOV10L1Q9BXT6 1211 aaKnown RBP21.98■■□□□ 1.11
USB1-213ENST00000566292 SH2D4AQ9H788 454 aa21.98■■□□□ 1.11
USB1-213ENST00000566292 FLRT1Q9NZU1 646 aa21.98■■□□□ 1.11
USB1-213ENST00000566292 OGDHLQ9ULD0 1010 aa21.98■■□□□ 1.11
USB1-213ENST00000566292 NR2E3Q9Y5X4 410 aa21.98■■□□□ 1.11
USB1-213ENST00000566292 TTC41PQ6P2S7 1318 aa21.98■■□□□ 1.11
USB1-213ENST00000566292 ZNFX1Q9P2E3 1918 aaKnown RBP21.98■■□□□ 1.11
USB1-213ENST00000566292 M0R2C6 588 aa21.97■■□□□ 1.11
USB1-213ENST00000566292 EEF2P13639 858 aaKnown RBP21.97■■□□□ 1.11
USB1-213ENST00000566292 DSG3P32926 999 aa21.97■■□□□ 1.11
USB1-213ENST00000566292 FXR1P51114 621 aaKnown RBP eCLIP21.97■■□□□ 1.11
USB1-213ENST00000566292 GIMAP6Q6P9H5 292 aa21.97■■□□□ 1.11
USB1-213ENST00000566292 PI4K2BQ8TCG2 481 aa21.97■■□□□ 1.11
USB1-213ENST00000566292 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.97■■□□□ 1.11
USB1-213ENST00000566292 EPB41L4AQ9HCS5 686 aaPredicted RBP21.97■■□□□ 1.11
USB1-213ENST00000566292 MYH4Q9Y623 1939 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 WDR46O15213 610 aaKnown RBP21.96■■□□□ 1.11
USB1-213ENST00000566292 GPAA1O43292 621 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 EVI5O60447 810 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 FLOT1O75955 427 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 ZFYP08048 801 aaPredicted RBP21.96■■□□□ 1.11
USB1-213ENST00000566292 HOXC6P09630 235 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 NPLOC4Q8TAT6 608 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 ATG4CQ96DT6 458 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 SPATC1LQ9H0A9 340 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 KANSL2Q9H9L4 492 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 IVNS1ABPQ9Y6Y0 642 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 ROBO3Q96MS0 1386 aa21.96■■□□□ 1.11
USB1-213ENST00000566292 RANBP2P49792 3224 aaKnown RBP21.96■■□□□ 1.11
USB1-213ENST00000566292 ATP2B2Q01814 1243 aa21.95■■□□□ 1.1
USB1-213ENST00000566292 STK11IPQ8N1F8 1099 aa21.95■■□□□ 1.1
USB1-213ENST00000566292 CRBNQ96SW2 442 aa21.95■■□□□ 1.1
USB1-213ENST00000566292 RBM27Q9P2N5 1060 aaKnown RBP21.95■■□□□ 1.1
USB1-213ENST00000566292 MINDY4BA8MYZ0 360 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 ERC2O15083 957 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 ERCC3P19447 782 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 RASA1P20936 1047 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 LHX8Q68G74 356 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 MB21D1Q8N884 522 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 SHCBP1Q8NEM2 672 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 NBPF3Q9H094 633 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 PRO3102Q9H379 93 aa21.94■■□□□ 1.1
USB1-213ENST00000566292 IGHA2P01877 340 aa21.93■■□□□ 1.1
USB1-213ENST00000566292 MFSD14CQ5VZR4 134 aa21.93■■□□□ 1.1
USB1-213ENST00000566292 SEC62Q99442 399 aaKnown RBP21.93■■□□□ 1.1
USB1-213ENST00000566292 SALL3Q9BXA9 1300 aa21.93■■□□□ 1.1
USB1-213ENST00000566292 PFASO15067 1338 aa21.92■■□□□ 1.1
USB1-213ENST00000566292 GNAT2P19087 354 aa21.92■■□□□ 1.1
USB1-213ENST00000566292 ADORA2AP29274 412 aa21.92■■□□□ 1.1
USB1-213ENST00000566292 SAMD1Q6SPF0 538 aaPredicted RBP21.92■■□□□ 1.1
USB1-213ENST00000566292 C11orf49Q9H6J7 331 aa21.92■■□□□ 1.1
USB1-213ENST00000566292 FBXO28Q9NVF7 368 aa21.92■■□□□ 1.1
USB1-213ENST00000566292 PCDH10Q9P2E7 1040 aa21.92■■□□□ 1.1
USB1-213ENST00000566292 STRNO43815 780 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 MX1P20591 662 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 CYP2C19P33261 490 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 TDO2P48775 406 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 PLS1Q14651 629 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 TMEM132BQ14DG7 1078 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 MKNK2Q9HBH9 465 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 GOPCQ9HD26 462 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms