RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 FDPSP14324 419 aaKnown RBP21.8■■□□□ 1.08
COMMD4-213ENST00000565834 SSRP1Q08945 709 aaKnown RBP21.8■■□□□ 1.08
COMMD4-213ENST00000565834 TMTC3Q6ZXV5 915 aa21.8■■□□□ 1.08
COMMD4-213ENST00000565834 KRT26Q7Z3Y9 468 aa21.8■■□□□ 1.08
COMMD4-213ENST00000565834 TRIM22Q8IYM9 498 aa21.8■■□□□ 1.08
COMMD4-213ENST00000565834 MKL1Q969V6 931 aa21.8■■□□□ 1.08
COMMD4-213ENST00000565834 STK36Q9NRP7 1315 aa21.8■■□□□ 1.08
COMMD4-213ENST00000565834 ADM5C9JUS6 153 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 PLEKHA8P1O95397 391 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 ASNSP08243 561 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 GNAQP50148 359 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 CMTR1Q8N1G2 835 aaKnown RBP21.79■■□□□ 1.08
COMMD4-213ENST00000565834 SLC26A6Q9BXS9 759 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 DOCK1Q14185 1865 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 WDR33Q9C0J8 1336 aaKnown RBP21.79■■□□□ 1.08
COMMD4-213ENST00000565834 SSC5DA1L4H1 1573 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 FMNL1O95466 1100 aaPredicted RBP21.79■■□□□ 1.08
COMMD4-213ENST00000565834 BRD1O95696 1058 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 PARP1P09874 1014 aaKnown RBP21.79■■□□□ 1.08
COMMD4-213ENST00000565834 CCDC82Q8N4S0 544 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 MAD2L2Q9UI95 211 aa21.79■■□□□ 1.08
COMMD4-213ENST00000565834 CTNND1O60716 968 aaKnown RBP21.78■■□□□ 1.08
COMMD4-213ENST00000565834 NBPF11Q86T75 865 aa21.78■■□□□ 1.08
COMMD4-213ENST00000565834 SIAH1Q8IUQ4 282 aa21.78■■□□□ 1.08
COMMD4-213ENST00000565834 ARHGEF10LQ9HCE6 1279 aa21.78■■□□□ 1.08
COMMD4-213ENST00000565834 GINM1Q9NU53 330 aa21.78■■□□□ 1.08
COMMD4-213ENST00000565834 ZDHHC9Q9Y397 364 aa21.78■■□□□ 1.08
COMMD4-213ENST00000565834 BAZ2BQ9UIF8 2168 aaKnown RBP21.78■■□□□ 1.08
COMMD4-213ENST00000565834 VPS37CA5D8V6 355 aaPredicted RBP21.77■■□□□ 1.08
COMMD4-213ENST00000565834 PDHBP11177 359 aa21.77■■□□□ 1.08
COMMD4-213ENST00000565834 RNF26Q9BY78 433 aaPredicted RBP21.77■■□□□ 1.08
COMMD4-213ENST00000565834 PALM3A6NDB9 673 aaPredicted RBP21.76■■□□□ 1.07
COMMD4-213ENST00000565834 USP17L5A8MUK1 530 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 AKAP17AQ02040 695 aaKnown RBP21.76■■□□□ 1.07
COMMD4-213ENST00000565834 FUT2Q10981 343 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 USP17L2Q6R6M4 530 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 RASGRP2Q7LDG7 609 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 STAG2Q8N3U4 1231 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 SRBD1Q8N5C6 995 aaKnown RBP21.76■■□□□ 1.07
COMMD4-213ENST00000565834 LZTS2Q9BRK4 669 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 ZNF112Q9UJU3 913 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 SYNPO2Q9UMS6 1093 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 CNTNAP5Q8WYK1 1306 aa21.76■■□□□ 1.07
COMMD4-213ENST00000565834 H3BQV1 296 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 SNHG28P0DPA3 235 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 VEGFAP15692 232 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-213ENST00000565834 ASPRV1Q53RT3 343 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 IFFO2Q5TF58 517 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 FOXD4L5Q5VV16 416 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-213ENST00000565834 USP48Q86UV5 1035 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 FOXD4L4Q8WXT5 416 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-213ENST00000565834 WASF1Q92558 559 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 WRNIP1Q96S55 665 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 MTMR6Q9Y217 621 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 DEXIO95424 95 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 GOLGA8HP0CJ92 632 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 ZSCAN22P10073 491 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-213ENST00000565834 INPP5BP32019 993 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 FOSBP53539 338 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 TNPO1Q92973 898 aaKnown RBP21.75■■□□□ 1.07
COMMD4-213ENST00000565834 ALG1Q9BT22 464 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-213ENST00000565834 CLEC11AQ9Y240 323 aa21.75■■□□□ 1.07
COMMD4-213ENST00000565834 KLRF2D3W0D1 207 aa21.74■■□□□ 1.07
COMMD4-213ENST00000565834 PRPF3O43395 683 aaKnown RBP21.74■■□□□ 1.07
COMMD4-213ENST00000565834 RAD21O60216 631 aa21.74■■□□□ 1.07
COMMD4-213ENST00000565834 DLK2Q6UY11 383 aa21.74■■□□□ 1.07
COMMD4-213ENST00000565834 GMCL1P1Q8NEA9 526 aa21.74■■□□□ 1.07
COMMD4-213ENST00000565834 C8orf76Q96K31 380 aa21.74■■□□□ 1.07
COMMD4-213ENST00000565834 SH2D4AQ9H788 454 aa21.74■■□□□ 1.07
COMMD4-213ENST00000565834 RRAGCQ9HB90 399 aa21.74■■□□□ 1.07
COMMD4-213ENST00000565834 A0A1W2PRG0 241 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 ZNF543Q08ER8 600 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 CCDC96Q2M329 555 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 SLFN13Q68D06 897 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 CDC37L1Q7L3B6 337 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 DCAF4Q8WV16 495 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 KLRG1Q96E93 195 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 CDCA5Q96FF9 252 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 TMX2Q9Y320 296 aa21.73■■□□□ 1.07
COMMD4-213ENST00000565834 V9GY48 417 aaPredicted RBP21.73■■□□□ 1.07
COMMD4-213ENST00000565834 FRMPD2Q68DX3 1309 aaPredicted RBP21.73■■□□□ 1.07
COMMD4-213ENST00000565834 F5H6K3 240 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 NF2P35240 595 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 ECE1P42892 770 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 KLRC3Q07444 240 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 GPATCH4Q5T3I0 446 aaKnown RBP21.72■■□□□ 1.07
COMMD4-213ENST00000565834 SCYL3Q8IZE3 742 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 ACER1Q8TDN7 264 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 AIFM3Q96NN9 605 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 GLIS2Q9BZE0 524 aaPredicted RBP21.72■■□□□ 1.07
COMMD4-213ENST00000565834 RBM27Q9P2N5 1060 aaKnown RBP21.72■■□□□ 1.07
COMMD4-213ENST00000565834 FZD1Q9UP38 647 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 UBE2Q2LH0YL09 131 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 PPP1R12BO60237 982 aaPredicted RBP21.72■■□□□ 1.07
COMMD4-213ENST00000565834 SLC1A4P43007 532 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 PRKG1Q13976 671 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 SPZ1Q9BXG8 430 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 GOPCQ9HD26 462 aa21.72■■□□□ 1.07
COMMD4-213ENST00000565834 PICK1Q9NRD5 415 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms