RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 LY9Q9HBG7 655 aa13□□□□□ -0.33
SF3B3-205ENST00000564899 SH2B1Q9NRF2 756 aaPredicted RBP13□□□□□ -0.33
SF3B3-205ENST00000564899 PLIN4Q96Q06 1357 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 KLF18A0A0U1RQI7 1052 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 LARGE1O95461 756 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 HSP90AA1P07900 732 aaKnown RBP12.99□□□□□ -0.33
SF3B3-205ENST00000564899 AKR1B1P15121 316 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 LIFRP42702 1097 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 ME3Q16798 604 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 CCDC178Q5BJE1 867 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 NBPF12Q5TAG4 269 aaPredicted RBP12.99□□□□□ -0.33
SF3B3-205ENST00000564899 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 ZNF333Q96JL9 665 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 CCDC17Q96LX7 622 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 TEPSINQ96N21 525 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.99□□□□□ -0.33
SF3B3-205ENST00000564899 NAP1L2Q9ULW6 460 aaPredicted RBP12.99□□□□□ -0.33
SF3B3-205ENST00000564899 PPP2R3BQ9Y5P8 575 aa12.99□□□□□ -0.33
SF3B3-205ENST00000564899 SIPA1L1O43166 1804 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 GOLGA8BA8MQT2 603 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 MPHOSPH10O00566 681 aaKnown RBP12.98□□□□□ -0.33
SF3B3-205ENST00000564899 TBC1D12O60347 775 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 NMT2O60551 498 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 ALDH1A1P00352 501 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 ZBTB48P10074 688 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-205ENST00000564899 SEC23AQ15436 765 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 CERKLQ49MI3 558 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-205ENST00000564899 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
SF3B3-205ENST00000564899 TATDN1Q6P1N9 297 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 SGMS1Q86VZ5 419 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 ENAHQ8N8S7 591 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-205ENST00000564899 EFCC1Q9HA90 598 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 SENP2Q9HC62 589 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 TCP11L1Q9NUJ3 509 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 BRPF3Q9ULD4 1205 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 CUL9Q8IWT3 2517 aa12.98□□□□□ -0.33
SF3B3-205ENST00000564899 H0YGN5 161 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 USP2O75604 605 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-205ENST00000564899 EVCP57679 992 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 STK3Q13188 491 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 CUL4AQ13619 759 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 SYNE3Q6ZMZ3 975 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 MIGA2Q7L4E1 593 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 TMTC2Q8N394 836 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 ZNF274Q96GC6 653 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-205ENST00000564899 ARHGAP39Q9C0H5 1083 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 SLKQ9H2G2 1235 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-205ENST00000564899 IL17RBQ9NRM6 502 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
SF3B3-205ENST00000564899 PFKFB2O60825 505 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 GDF11O95390 407 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 PDIA3P30101 505 aaKnown RBP12.96□□□□□ -0.33
SF3B3-205ENST00000564899 SP3Q02447 781 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 MAP3K10Q02779 954 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 ABCB5Q2M3G0 1257 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 APOA5Q6Q788 366 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 DGKHQ86XP1 1220 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 RAB11FIP4Q86YS3 637 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 NECAB1Q8N987 351 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 GTF3C6Q969F1 213 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 HOOK2Q96ED9 719 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 CEP95Q96GE4 821 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 ERO1AQ96HE7 468 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.33
SF3B3-205ENST00000564899 KAT14Q9H8E8 782 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 ELP3Q9H9T3 547 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 STX8Q9UNK0 236 aa12.96□□□□□ -0.33
SF3B3-205ENST00000564899 IGKV6D-41A0A0C4DH26 115 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 GOLGA8AA7E2F4 631 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 ZBTB43O43298 467 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
SF3B3-205ENST00000564899 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 SCRN1Q12765 414 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 RRP1BQ14684 758 aaKnown RBP12.95□□□□□ -0.34
SF3B3-205ENST00000564899 SUPT20HL1Q3ZLR7 823 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 DCAF15Q66K64 600 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 RCSD1Q6JBY9 416 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 TMEM179Q6ZVK1 233 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 CATIPQ7Z7H3 387 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 MICU3Q86XE3 530 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 ZNF654Q8IZM8 581 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 BRI3BPQ8WY22 251 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 ANKS1AQ92625 1134 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 INTS4Q96HW7 963 aaKnown RBP12.95□□□□□ -0.34
SF3B3-205ENST00000564899 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 CABP5Q9NP86 173 aa12.95□□□□□ -0.34
SF3B3-205ENST00000564899 TESPA1A2RU30 521 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-205ENST00000564899 DDAH1O94760 285 aa12.94□□□□□ -0.34
SF3B3-205ENST00000564899 ECM2O94769 699 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-205ENST00000564899 GH2P01242 217 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms