RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 MAD2L2Q9UI95 211 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 SOCS7O14512 581 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 TBC1D12O60347 775 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 GH2P01242 217 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
SNX29-204ENST00000564791 HIRAP54198 1017 aaPredicted RBP13.06□□□□□ -0.32
SNX29-204ENST00000564791 RESTQ13127 1097 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
SNX29-204ENST00000564791 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 STAG2Q8N3U4 1231 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 RNF26Q9BY78 433 aaPredicted RBP13.06□□□□□ -0.32
SNX29-204ENST00000564791 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 DDX11L8A8MPP1 907 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 DEXIO95424 95 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 ATP2B2Q01814 1243 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 ICA1Q05084 483 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 MIGA2Q7L4E1 593 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
SNX29-204ENST00000564791 WASF1Q92558 559 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 DEFB129Q9H1M3 183 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 KANSL2Q9H9L4 492 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 GGA3Q9NZ52 723 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 ATP6V1DQ9Y5K8 247 aa13.06□□□□□ -0.32
SNX29-204ENST00000564791 hCG_1642624A0A1W2PR95 340 aa13.05□□□□□ -0.32
SNX29-204ENST00000564791 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
SNX29-204ENST00000564791 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
SNX29-204ENST00000564791 PRPF3O43395 683 aaKnown RBP13.05□□□□□ -0.32
SNX29-204ENST00000564791 EEF2P13639 858 aaKnown RBP13.05□□□□□ -0.32
SNX29-204ENST00000564791 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
SNX29-204ENST00000564791 MAP3K10Q02779 954 aa13.05□□□□□ -0.32
SNX29-204ENST00000564791 FBXO18Q8NFZ0 1043 aa13.05□□□□□ -0.32
SNX29-204ENST00000564791 CABP5Q9NP86 173 aa13.05□□□□□ -0.32
SNX29-204ENST00000564791 ADARB2Q9NS39 739 aaKnown RBP13.05□□□□□ -0.32
SNX29-204ENST00000564791 NYAP2Q9P242 653 aa13.05□□□□□ -0.32
SNX29-204ENST00000564791 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
SNX29-204ENST00000564791 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 PDHBP11177 359 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 GNAQP50148 359 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 PKN1Q16512 942 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 KRT40Q6A162 431 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 USP17L2Q6R6M4 530 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 ZBTB21Q9ULJ3 1066 aa13.04□□□□□ -0.32
SNX29-204ENST00000564791 V9GY48 417 aaPredicted RBP13.04□□□□□ -0.32
SNX29-204ENST00000564791 ZC3H4Q9UPT8 1303 aaKnown RBP13.04□□□□□ -0.32
SNX29-204ENST00000564791 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
SNX29-204ENST00000564791 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
SNX29-204ENST00000564791 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
SNX29-204ENST00000564791 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
SNX29-204ENST00000564791 SIAH1Q8IUQ4 282 aa13.03□□□□□ -0.32
SNX29-204ENST00000564791 MKL1Q969V6 931 aa13.03□□□□□ -0.32
SNX29-204ENST00000564791 L3MBTL3Q96JM7 780 aaPredicted RBP13.03□□□□□ -0.32
SNX29-204ENST00000564791 ZSCAN16Q9H4T2 348 aaPredicted RBP13.03□□□□□ -0.32
SNX29-204ENST00000564791 FRMPD2Q68DX3 1309 aaPredicted RBP13.03□□□□□ -0.32
SNX29-204ENST00000564791 DOCK1Q14185 1865 aa13.03□□□□□ -0.32
SNX29-204ENST00000564791 KLRF2D3W0D1 207 aa13.02□□□□□ -0.32
SNX29-204ENST00000564791 KIF23Q02241 960 aaPredicted RBP13.02□□□□□ -0.32
SNX29-204ENST00000564791 DNM1Q05193 864 aaKnown RBP13.02□□□□□ -0.32
SNX29-204ENST00000564791 TRIM29Q14134 588 aa13.02□□□□□ -0.32
SNX29-204ENST00000564791 PIBF1Q8WXW3 757 aa13.02□□□□□ -0.32
SNX29-204ENST00000564791 LZTS2Q9BRK4 669 aa13.02□□□□□ -0.32
SNX29-204ENST00000564791 CPVLQ9H3G5 476 aa13.02□□□□□ -0.32
SNX29-204ENST00000564791 CNPY2Q9Y2B0 182 aa13.02□□□□□ -0.32
SNX29-204ENST00000564791 SCN4AP35499 1836 aa13.02□□□□□ -0.32
SNX29-204ENST00000564791 PHF20L1A8MW92 1017 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 KIF28PB7ZC32 967 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 CYTH3O43739 400 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.33
SNX29-204ENST00000564791 CAP2P40123 477 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 ASPRV1Q53RT3 343 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 SHISA4Q96DD7 197 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 GDPD2Q9HCC8 539 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 VPS54Q9P1Q0 977 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.02□□□□□ -0.33
SNX29-204ENST00000564791 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 PITPNM2Q9BZ72 1349 aa13.02□□□□□ -0.33
SNX29-204ENST00000564791 SSC5DA1L4H1 1573 aa13.01□□□□□ -0.33
SNX29-204ENST00000564791 GLTPD2A6NH11 291 aa13.01□□□□□ -0.33
SNX29-204ENST00000564791 SCG2P13521 617 aa13.01□□□□□ -0.33
SNX29-204ENST00000564791 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
SNX29-204ENST00000564791 PFKFB3Q16875 520 aaPredicted RBP13.01□□□□□ -0.33
SNX29-204ENST00000564791 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
SNX29-204ENST00000564791 SLFN13Q68D06 897 aa13.01□□□□□ -0.33
SNX29-204ENST00000564791 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
SNX29-204ENST00000564791 LMBRD1Q9NUN5 540 aa13.01□□□□□ -0.33
SNX29-204ENST00000564791 RBM27Q9P2N5 1060 aaKnown RBP13.01□□□□□ -0.33
SNX29-204ENST00000564791 WDR90Q96KV7 1748 aa13□□□□□ -0.33
SNX29-204ENST00000564791 A0A1W2PRG0 241 aa13□□□□□ -0.33
SNX29-204ENST00000564791 FIBPO43427 364 aa13□□□□□ -0.33
SNX29-204ENST00000564791 RAD21O60216 631 aa13□□□□□ -0.33
SNX29-204ENST00000564791 PRPF40AO75400 957 aaKnown RBP13□□□□□ -0.33
SNX29-204ENST00000564791 MMP1P03956 469 aa13□□□□□ -0.33
SNX29-204ENST00000564791 PTMSP20962 102 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms