RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 SH3D19Q5HYK7 790 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 PPP4R3BQ5MIZ7 849 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 RASGRP2Q7LDG7 609 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 PRRT2Q7Z6L0 340 aaPredicted RBP18.24■□□□□ 0.51
CDH11-209ENST00000564317 TMEM87BQ96K49 555 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 TTC14Q96N46 770 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 MTA3Q9BTC8 594 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 EMILIN3Q9NT22 766 aa18.24■□□□□ 0.51
CDH11-209ENST00000564317 PTPRFP10586 1907 aa18.23■□□□□ 0.51
CDH11-209ENST00000564317 WTAPQ15007 396 aa18.23■□□□□ 0.51
CDH11-209ENST00000564317 IFIT1BQ5T764 474 aaKnown RBP18.23■□□□□ 0.51
CDH11-209ENST00000564317 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
CDH11-209ENST00000564317 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
CDH11-209ENST00000564317 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
CDH11-209ENST00000564317 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
CDH11-209ENST00000564317 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
CDH11-209ENST00000564317 LOC285556D6RIA3 1793 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 MYH4Q9Y623 1939 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 ERICH2A1L162 156 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 C19orf81C9J6K1 198 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 NDUFB10O96000 172 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 GTF2A2P52657 109 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 SART3Q15020 963 aaKnown RBP18.22■□□□□ 0.51
CDH11-209ENST00000564317 Q6ZUG5 572 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 C12orf42Q96LP6 360 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 SH2D4AQ9H788 454 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 SYNPO2Q9UMS6 1093 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 THSD7BQ9C0I4 1608 aa18.22■□□□□ 0.51
CDH11-209ENST00000564317 CCL15-CCL14A0A0B4J2E2 113 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 TESPA1A2RU30 521 aaPredicted RBP18.21■□□□□ 0.51
CDH11-209ENST00000564317 F5H6K3 240 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 CETPP11597 493 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 USP14P54578 494 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 KIF23Q02241 960 aaPredicted RBP18.21■□□□□ 0.51
CDH11-209ENST00000564317 KLRC3Q07444 240 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 NOGQ13253 232 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 CCL15Q16663 113 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 TREML2Q5T2D2 321 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 GADL1Q6ZQY3 521 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 SPICE1Q8N0Z3 855 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 GMCL1P1Q8NEA9 526 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 CHMP4CQ96CF2 233 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 KAT14Q9H8E8 782 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 PDRG1Q9NUG6 133 aa18.21■□□□□ 0.51
CDH11-209ENST00000564317 MANSC4A6NHS7 340 aaPredicted RBP18.2■□□□□ 0.5
CDH11-209ENST00000564317 VCAM1P19320 739 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 LIFRP42702 1097 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 TOB2Q14106 344 aaPredicted RBP18.2■□□□□ 0.5
CDH11-209ENST00000564317 SLFN13Q68D06 897 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 GPAT2Q6NUI2 795 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 PNMA1Q8ND90 353 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
CDH11-209ENST00000564317 PTPN18Q99952 460 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 AGXT2Q9BYV1 514 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 GOPCQ9HD26 462 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 TMOD4Q9NZQ9 345 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 MTMR7Q9Y216 660 aa18.2■□□□□ 0.5
CDH11-209ENST00000564317 RAD21O60216 631 aa18.19■□□□□ 0.5
CDH11-209ENST00000564317 NEK4P51957 841 aa18.19■□□□□ 0.5
CDH11-209ENST00000564317 SGMS1Q86VZ5 419 aa18.19■□□□□ 0.5
CDH11-209ENST00000564317 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
CDH11-209ENST00000564317 PROCA1Q8NCQ7 364 aaPredicted RBP18.19■□□□□ 0.5
CDH11-209ENST00000564317 BRF1Q92994 677 aa18.19■□□□□ 0.5
CDH11-209ENST00000564317 MYL10Q9BUA6 226 aa18.19■□□□□ 0.5
CDH11-209ENST00000564317 BRPF3Q9ULD4 1205 aa18.19■□□□□ 0.5
CDH11-209ENST00000564317 BTBD19C9JJ37 291 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 IGF2BP3O00425 579 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDH11-209ENST00000564317 FGD1P98174 961 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 APOBRQ0VD83 1088 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 RABEP1Q15276 862 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 FASTKD5Q7L8L6 764 aaKnown RBP18.18■□□□□ 0.5
CDH11-209ENST00000564317 RAB11FIP4Q86YS3 637 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 ZNF654Q8IZM8 581 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 FAM43AQ8N2R8 423 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 LPAR1Q92633 364 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 LARP6Q9BRS8 491 aaKnown RBP18.18■□□□□ 0.5
CDH11-209ENST00000564317 RPAP3Q9H6T3 665 aaPredicted RBP18.18■□□□□ 0.5
CDH11-209ENST00000564317 AGTPBP1Q9UPW5 1226 aa18.18■□□□□ 0.5
CDH11-209ENST00000564317 CCDC69A6NI79 296 aa18.17■□□□□ 0.5
CDH11-209ENST00000564317 SNHG28P0DPA3 235 aa18.17■□□□□ 0.5
CDH11-209ENST00000564317 PDHBP11177 359 aa18.17■□□□□ 0.5
CDH11-209ENST00000564317 AK2P54819 239 aa18.17■□□□□ 0.5
CDH11-209ENST00000564317 FAM83BQ5T0W9 1011 aa18.17■□□□□ 0.5
CDH11-209ENST00000564317 GMCL1Q96IK5 515 aa18.17■□□□□ 0.5
CDH11-209ENST00000564317 ALDH8A1Q9H2A2 487 aaPredicted RBP18.17■□□□□ 0.5
CDH11-209ENST00000564317 KLF18A0A0U1RQI7 1052 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 WDR46O15213 610 aaKnown RBP18.16■□□□□ 0.5
CDH11-209ENST00000564317 RXRAP19793 462 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 TM4SF4P48230 202 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 SREBF2Q12772 1141 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 TROAPQ12815 778 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 APOA5Q6Q788 366 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 CATIPQ7Z7H3 387 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 ANKRD23Q86SG2 305 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 TMTC2Q8N394 836 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 DNAJC5GQ8N7S2 189 aa18.16■□□□□ 0.5
CDH11-209ENST00000564317 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms