RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ANKRD23Q86SG2 305 aa19.9■□□□□ 0.78
CMTM3-208ENST00000564247 TMTC2Q8N394 836 aa19.9■□□□□ 0.78
CMTM3-208ENST00000564247 NEDD1Q8NHV4 660 aa19.9■□□□□ 0.78
CMTM3-208ENST00000564247 A0A0G2JLL6 359 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-208ENST00000564247 CAP2P40123 477 aa19.89■□□□□ 0.77
CMTM3-208ENST00000564247 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
CMTM3-208ENST00000564247 TMEM67Q5HYA8 995 aa19.89■□□□□ 0.77
CMTM3-208ENST00000564247 PPP4R3BQ5MIZ7 849 aa19.89■□□□□ 0.77
CMTM3-208ENST00000564247 PRRT2Q7Z6L0 340 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-208ENST00000564247 TCEANC2Q96MN5 208 aa19.89■□□□□ 0.77
CMTM3-208ENST00000564247 TTC14Q96N46 770 aa19.89■□□□□ 0.77
CMTM3-208ENST00000564247 ZSCAN10Q96SZ4 725 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-208ENST00000564247 DNAJC18Q9H819 358 aa19.89■□□□□ 0.77
CMTM3-208ENST00000564247 TCP11L1Q9NUJ3 509 aa19.89■□□□□ 0.77
CMTM3-208ENST00000564247 ANTXR2P58335 489 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 BECN1Q14457 450 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 RRP1BQ14684 758 aaKnown RBP19.88■□□□□ 0.77
CMTM3-208ENST00000564247 WTAPQ15007 396 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 ABCB5Q2M3G0 1257 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 FBXL16Q8N461 479 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 SNX21Q969T3 373 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 ZKSCAN3Q9BRR0 538 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 LRRC2Q9BYS8 371 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 TBC1D2Q9BYX2 928 aa19.88■□□□□ 0.77
CMTM3-208ENST00000564247 TLR2O60603 784 aa19.87■□□□□ 0.77
CMTM3-208ENST00000564247 AKR1B1P15121 316 aa19.87■□□□□ 0.77
CMTM3-208ENST00000564247 AK2P54819 239 aa19.87■□□□□ 0.77
CMTM3-208ENST00000564247 SP3Q02447 781 aa19.87■□□□□ 0.77
CMTM3-208ENST00000564247 FASTKD5Q7L8L6 764 aaKnown RBP19.87■□□□□ 0.77
CMTM3-208ENST00000564247 HSCBQ8IWL3 235 aa19.87■□□□□ 0.77
CMTM3-208ENST00000564247 IGDCC4Q8TDY8 1250 aa19.87■□□□□ 0.77
CMTM3-208ENST00000564247 ERO1AQ96HE7 468 aa19.87■□□□□ 0.77
CMTM3-208ENST00000564247 PDHXO00330 501 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 LIFRP42702 1097 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 COL9A3Q14050 684 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-208ENST00000564247 GPAT2Q6NUI2 795 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 SYNE3Q6ZMZ3 975 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 NFXL1Q6ZNB6 911 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 TMEM179Q6ZVK1 233 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 NKX2-3Q8TAU0 364 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 BRF1Q92994 677 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 GINM1Q9NU53 330 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-208ENST00000564247 LIMCH1Q9UPQ0 1083 aa19.86■□□□□ 0.77
CMTM3-208ENST00000564247 TNKSO95271 1327 aa19.85■□□□□ 0.77
CMTM3-208ENST00000564247 CCDC69A6NI79 296 aa19.85■□□□□ 0.77
CMTM3-208ENST00000564247 SH2B2O14492 632 aaPredicted RBP19.85■□□□□ 0.77
CMTM3-208ENST00000564247 GDF11O95390 407 aa19.85■□□□□ 0.77
CMTM3-208ENST00000564247 IFIT1BQ5T764 474 aaKnown RBP19.85■□□□□ 0.77
CMTM3-208ENST00000564247 DGKHQ86XP1 1220 aa19.85■□□□□ 0.77
CMTM3-208ENST00000564247 ZSCAN31Q96LW9 406 aaPredicted RBP19.85■□□□□ 0.77
CMTM3-208ENST00000564247 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
CMTM3-208ENST00000564247 KANSL2Q9H9L4 492 aa19.85■□□□□ 0.77
CMTM3-208ENST00000564247 HTTP42858 3142 aa19.85■□□□□ 0.77
CMTM3-208ENST00000564247 TRIM75PA6NK02 468 aa19.84■□□□□ 0.77
CMTM3-208ENST00000564247 USP17L5A8MUK1 530 aa19.84■□□□□ 0.77
CMTM3-208ENST00000564247 ASNSP08243 561 aa19.84■□□□□ 0.77
CMTM3-208ENST00000564247 TOB2Q14106 344 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-208ENST00000564247 NOL8Q76FK4 1167 aaKnown RBP19.84■□□□□ 0.77
CMTM3-208ENST00000564247 CCDC84Q86UT8 332 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-208ENST00000564247 ENAHQ8N8S7 591 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-208ENST00000564247 ZNF280CQ8ND82 737 aa19.84■□□□□ 0.77
CMTM3-208ENST00000564247 CD99L2Q8TCZ2 262 aa19.84■□□□□ 0.77
CMTM3-208ENST00000564247 IL17RBQ9NRM6 502 aa19.84■□□□□ 0.77
CMTM3-208ENST00000564247 NAP1L2Q9ULW6 460 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-208ENST00000564247 CCDC85CA6NKD9 419 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 NMT2O60551 498 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 GH2P01242 217 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 SPP2Q13103 211 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 RAB3GAP1Q15042 981 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 SEC23AQ15436 765 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 FBXO46Q6PJ61 603 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-208ENST00000564247 GADL1Q6ZQY3 521 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 OTOP1Q7RTM1 612 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 ANKS1AQ92625 1134 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 KAT14Q9H8E8 782 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 LY9Q9HBG7 655 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 AS3MTQ9HBK9 375 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 MTMR4Q9NYA4 1195 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 DAXXQ9UER7 740 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-208ENST00000564247 STX8Q9UNK0 236 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 SLC45A1Q9Y2W3 748 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 TRIM17Q9Y577 477 aa19.83■□□□□ 0.77
CMTM3-208ENST00000564247 LOC285556D6RIA3 1793 aa19.83■□□□□ 0.76
CMTM3-208ENST00000564247 PLIN4Q96Q06 1357 aa19.83■□□□□ 0.76
CMTM3-208ENST00000564247 ADGRA2Q96PE1 1338 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 TTLL1O95922 423 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 JAG1P78504 1218 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 APOBRQ0VD83 1088 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 SEPT2Q15019 361 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 C17orf99Q6UX52 265 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 CEP95Q96GE4 821 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 PARK7Q99497 189 aaKnown RBP19.82■□□□□ 0.76
CMTM3-208ENST00000564247 WDR18Q9BV38 432 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.82■□□□□ 0.76
CMTM3-208ENST00000564247 GPHNQ9NQX3 736 aaPredicted RBP19.82■□□□□ 0.76
CMTM3-208ENST00000564247 ZBTB21Q9ULJ3 1066 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 HPS5Q9UPZ3 1129 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 SLC12A7Q9Y666 1083 aa19.82■□□□□ 0.76
CMTM3-208ENST00000564247 IGKV6D-41A0A0C4DH26 115 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms