RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 BAZ2AQ9UIF9 1905 aaKnown RBP12.74□□□□□ -0.37
SF3B3-204ENST00000563739 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
SF3B3-204ENST00000563739 MCM3APO60318 1980 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 TMEM265A0A087WTH1 108 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 SEPT4O43236 478 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 PLCD1P51178 756 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
SF3B3-204ENST00000563739 ATP2B2Q01814 1243 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 TLE2Q04725 743 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 WDR78Q5VTH9 848 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 CLEC10AQ8IUN9 316 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 SIAH1Q8IUQ4 282 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 FERMT2Q96AC1 680 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 LENG1Q96BZ8 264 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-204ENST00000563739 PHF24Q9UPV7 400 aa12.73□□□□□ -0.37
SF3B3-204ENST00000563739 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-204ENST00000563739 SMIM22K7EJ46 135 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 ANP32CO43423 234 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 BAG3O95817 575 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 PLCG2P16885 1265 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 TAL1P17542 331 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-204ENST00000563739 CCNA1P78396 465 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 SEPT2Q15019 361 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 MIGA1Q8NAN2 632 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-204ENST00000563739 RIOK1Q9BRS2 568 aaKnown RBP12.72□□□□□ -0.37
SF3B3-204ENST00000563739 SPATC1LQ9H0A9 340 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
SF3B3-204ENST00000563739 GNAI3P08754 354 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 ERCC3P19447 782 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 DNAJB2P25686 324 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 RAB3GAP1Q15042 981 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 SHCBP1Q8NEM2 672 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 FAM122AQ96E09 287 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 MAML3Q96JK9 1138 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 FEZ1Q99689 392 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 SERPINB13Q9UIV8 391 aa12.71□□□□□ -0.37
SF3B3-204ENST00000563739 MYO9BQ13459 2157 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 KBTBD13C9JR72 458 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
SF3B3-204ENST00000563739 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 TRIM27P14373 513 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 CYP7A1P22680 504 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 USP14P54578 494 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 IRX5P78411 483 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-204ENST00000563739 ADGRE1Q14246 886 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 ABCB5Q2M3G0 1257 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 TJAP1Q5JTD0 557 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 GORABQ5T7V8 394 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 RASIP1Q5U651 963 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 C16orf59Q7L2K0 433 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
SF3B3-204ENST00000563739 ATG4CQ96DT6 458 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 RNPC3Q96LT9 517 aaKnown RBP12.7□□□□□ -0.38
SF3B3-204ENST00000563739 PRKAG2Q9UGJ0 569 aa12.7□□□□□ -0.38
SF3B3-204ENST00000563739 A0A1W2PQ45 241 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-204ENST00000563739 A0A1W2PQY0 241 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 CLTBP09497 229 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 ZNF865P0CJ78 1059 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-204ENST00000563739 PBX2P40425 430 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 FAAP100Q0VG06 881 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-204ENST00000563739 TTC39AQ5SRH9 613 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-204ENST00000563739 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 ARRDC4Q8NCT1 418 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 SSH3Q8TE77 659 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 ARHGAP45Q92619 1136 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 EAF2Q96CJ1 260 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-204ENST00000563739 NOL10Q9BSC4 688 aaKnown RBP12.69□□□□□ -0.38
SF3B3-204ENST00000563739 TBX21Q9UL17 535 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
SF3B3-204ENST00000563739 MYADML2A6NDP7 307 aa12.68□□□□□ -0.38
SF3B3-204ENST00000563739 TNFRSF10AO00220 468 aa12.68□□□□□ -0.38
SF3B3-204ENST00000563739 ADCY6O43306 1168 aa12.68□□□□□ -0.38
SF3B3-204ENST00000563739 PGK1P00558 417 aa12.68□□□□□ -0.38
SF3B3-204ENST00000563739 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-204ENST00000563739 CYP2D6P10635 497 aa12.68□□□□□ -0.38
SF3B3-204ENST00000563739 DSG3P32926 999 aa12.68□□□□□ -0.38
SF3B3-204ENST00000563739 REPS2Q8NFH8 660 aa12.68□□□□□ -0.38
SF3B3-204ENST00000563739 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.68□□□□□ -0.384e-9■□□□□ 10.4
SF3B3-204ENST00000563739 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
SF3B3-204ENST00000563739 TCF20Q9UGU0 1960 aaKnown RBP12.68□□□□□ -0.38
SF3B3-204ENST00000563739 LCTP09848 1927 aa12.68□□□□□ -0.38
SF3B3-204ENST00000563739 GRXCR1A8MXD5 290 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 STRNO43815 780 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 GNAI2P04899 355 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.381e-7■■□□□ 12.9
SF3B3-204ENST00000563739 TMEM132BQ14DG7 1078 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 ZNF792Q3KQV3 632 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 DPP9Q86TI2 863 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 ABRAQ8N0Z2 381 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 SNX27Q96L92 541 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 TRIM34Q9BYJ4 488 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
SF3B3-204ENST00000563739 HDAC5Q9UQL6 1122 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms