RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PDCLQ13371 301 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 LRRC31Q6UY01 552 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 BICDL1Q6ZP65 573 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 TSNARE1Q96NA8 513 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 NESP48681 1621 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 MGEA5O60502 916 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 HMOX1P09601 288 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 TMEM266Q2M3C6 531 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 RETREG2Q8NC44 543 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 TCP11L1Q9NUJ3 509 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 MTMR6Q9Y217 621 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 TTC21AQ8NDW8 1320 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 A0A1B0GVL5 298 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 SRRM3A6NNA2 597 aaPredicted RBP6.89□□□□□ -1.31
CLK3-212ENST00000563418 MAPK13O15264 365 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 SERPINI2O75830 405 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 ERCC5P28715 1186 aaPredicted RBP6.89□□□□□ -1.31
CLK3-212ENST00000563418 CHMP6Q96FZ7 201 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 SCHIP1Q9P0W5 487 aaPredicted RBP6.89□□□□□ -1.31
CLK3-212ENST00000563418 DNAI2Q9GZS0 605 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 STK26Q9P289 416 aa6.89□□□□□ -1.31
CLK3-212ENST00000563418 TRIM37O94972 964 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 RPS6KB1P23443 525 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 RILPL1Q5EBL4 403 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 DAB2IPQ5VWQ8 1189 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 KIAA0825Q8IV33 1275 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 GRAMD1AQ96CP6 724 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 G3BP2Q9UN86 482 aaKnown RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 DIAPH2O60879 1101 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 SASH1O94885 1247 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 METAP2P50579 478 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLK3-212ENST00000563418 RPS6KA1Q15418 735 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 ANO1Q5XXA6 986 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 CREB3L3Q68CJ9 461 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 CDC37L1Q7L3B6 337 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 SNX29Q8TEQ0 813 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 SOS1Q07889 1333 aaPredicted RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 PTPDC1A2A3K4 754 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 STRNO43815 780 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 AP1G2O75843 785 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 CYP2E1P05181 493 aaPredicted RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 CATSPER1Q8NEC5 780 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 CFAP61Q8NHU2 1237 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 KDM4CQ9H3R0 1056 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 IRAK1P51617 712 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 SLC9C1Q4G0N8 1177 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 TMED8Q6PL24 325 aaPredicted RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 CALML4Q96GE6 196 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 CCT8L2Q96SF2 557 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 DESI2Q9BSY9 194 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 KAT14Q9H8E8 782 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 KCND1Q9NSA2 647 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 SAMD9Q5K651 1589 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 IMPDH2P12268 514 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 KCNA3P22001 575 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 STAT6P42226 847 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 TPD52P55327 224 aaPredicted RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 OLFML1Q6UWY5 402 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 EP400NLQ6ZTU2 488 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 TRMT2AQ8IZ69 625 aaKnown RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 TEKT1Q969V4 418 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 ADKP55263 362 aaKnown RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 POSTNQ15063 836 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 PODNQ7Z5L7 613 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 SLC35F6Q8N357 371 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 NCOA7Q8NI08 942 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 ZNF473Q8WTR7 871 aaKnown RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 SLF1Q9BQI6 1058 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 TRIM55Q9BYV6 548 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 CD248Q9HCU0 757 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 CIDEBQ9UHD4 219 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 MAGEA13PA6NCF6 341 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 GUCY2FP51841 1108 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 PPP2R2AP63151 447 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 AGGF1Q8N302 714 aaeCLIP6.88□□□□□ -1.31
CLK3-212ENST00000563418 GORASP1Q9BQQ3 440 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 FUT8Q9BYC5 575 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 HAUS2Q9NVX0 235 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 RRS1Q15050 365 aaKnown RBP6.88□□□□□ -1.31
CLK3-212ENST00000563418 CEP85Q6P2H3 762 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 DNAJC9Q8WXX5 260 aa6.88□□□□□ -1.31
CLK3-212ENST00000563418 DDIT3P35638 169 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 AP2B1P63010 937 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 Q6ZUG5 572 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 HEATR3Q7Z4Q2 680 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 MRPL50Q8N5N7 158 aaKnown RBP6.87□□□□□ -1.31
CLK3-212ENST00000563418 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
CLK3-212ENST00000563418 EPS15L1Q9UBC2 864 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 HPCAL4Q9UM19 191 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 NVLO15381 856 aaKnown RBP6.87□□□□□ -1.31
CLK3-212ENST00000563418 ATP5JP18859 108 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 MAGEA8P43361 318 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 RPS6KA3P51812 740 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 USP14P54578 494 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 PAK1Q13153 545 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 LRIG3Q6UXM1 1119 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 MSANTD4Q8NCY6 345 aa6.87□□□□□ -1.31
CLK3-212ENST00000563418 NUDCD1Q96RS6 583 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms