RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 DYNLL2Q96FJ2 89 aa20.34■□□□□ 0.85
HDGFL3-203ENST00000563404 FRMPD3Q5JV73 1810 aa20.33■□□□□ 0.85
HDGFL3-203ENST00000563404 GLRX3O76003 335 aaKnown RBP20.33■□□□□ 0.85
HDGFL3-203ENST00000563404 CLEC10AQ8IUN9 316 aa20.33■□□□□ 0.85
HDGFL3-203ENST00000563404 TRPV1Q8NER1 839 aa20.33■□□□□ 0.85
HDGFL3-203ENST00000563404 BOLA2Q9H3K6 86 aa20.33■□□□□ 0.85
HDGFL3-203ENST00000563404 RLFQ13129 1914 aa20.33■□□□□ 0.84
HDGFL3-203ENST00000563404 CYP2C19P33261 490 aa20.32■□□□□ 0.84
HDGFL3-203ENST00000563404 ADD2P35612 726 aa20.32■□□□□ 0.84
HDGFL3-203ENST00000563404 COG2Q14746 738 aa20.32■□□□□ 0.84
HDGFL3-203ENST00000563404 MFSD14CQ5VZR4 134 aa20.32■□□□□ 0.84
HDGFL3-203ENST00000563404 MOV10L1Q9BXT6 1211 aaKnown RBP20.32■□□□□ 0.84
HDGFL3-203ENST00000563404 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 MBD4O95243 580 aa20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 MS4A1P11836 297 aa20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 AKR1B1P15121 316 aa20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 ATP2B2Q01814 1243 aa20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 PAG1Q9NWQ8 432 aa20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 DDX20Q9UHI6 824 aaKnown RBP20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 DDX19BQ9UMR2 479 aa20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 IVNS1ABPQ9Y6Y0 642 aa20.31■□□□□ 0.84
HDGFL3-203ENST00000563404 A0A0G2JMZ2 1700 aa20.3■□□□□ 0.84
HDGFL3-203ENST00000563404 CYP2D7A0A087X1C5 515 aa20.3■□□□□ 0.84
HDGFL3-203ENST00000563404 HMMRO75330 724 aa20.3■□□□□ 0.84
HDGFL3-203ENST00000563404 ATP5JP18859 108 aa20.3■□□□□ 0.84
HDGFL3-203ENST00000563404 TMEM179Q6ZVK1 233 aa20.3■□□□□ 0.84
HDGFL3-203ENST00000563404 TANGO6Q9C0B7 1094 aa20.3■□□□□ 0.84
HDGFL3-203ENST00000563404 SPATC1LQ9H0A9 340 aa20.3■□□□□ 0.84
HDGFL3-203ENST00000563404 SWAP70Q9UH65 585 aa20.3■□□□□ 0.84
HDGFL3-203ENST00000563404 ADORA2AP29274 412 aa20.29■□□□□ 0.84
HDGFL3-203ENST00000563404 HAUS7Q99871 368 aa20.29■□□□□ 0.84
HDGFL3-203ENST00000563404 HOXC10Q9NYD6 342 aa20.29■□□□□ 0.84
HDGFL3-203ENST00000563404 ZNF236Q9UL36 1845 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 COBLO75128 1261 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 CYBAP13498 195 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 ERCC3P19447 782 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 CNGA1P29973 690 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 DSG3P32926 999 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 LRIT3Q3SXY7 679 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 TDHQ8IZJ6 230 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 SPICE1Q8N0Z3 855 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 UBE2OQ9C0C9 1292 aaKnown RBP20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 SENP6Q9GZR1 1112 aaPredicted RBP20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 ATP8A2Q9NTI2 1148 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 TMX2Q9Y320 296 aa20.28■□□□□ 0.84
HDGFL3-203ENST00000563404 BAZ2AQ9UIF9 1905 aaKnown RBP20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 CDK8P49336 464 aa20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 ICA1Q05084 483 aa20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 C12orf60Q5U649 245 aa20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 DPP9Q86TI2 863 aa20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 SHCBP1Q8NEM2 672 aa20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 LPAR1Q92633 364 aa20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 ATG4CQ96DT6 458 aa20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 VCPKMTQ9H867 229 aa20.27■□□□□ 0.84
HDGFL3-203ENST00000563404 USP17L12C9JPN9 530 aa20.26■□□□□ 0.83
HDGFL3-203ENST00000563404 USP17L21D6R901 530 aa20.26■□□□□ 0.83
HDGFL3-203ENST00000563404 MDM2Q00987 491 aaPredicted RBP20.26■□□□□ 0.83
HDGFL3-203ENST00000563404 OLFML2BQ68BL8 750 aa20.26■□□□□ 0.83
HDGFL3-203ENST00000563404 Q7L0L9 218 aa20.26■□□□□ 0.83
HDGFL3-203ENST00000563404 STRNO43815 780 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 SMARCA5O60264 1052 aaPredicted RBP20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 MSCO60682 206 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 FLOT1O75955 427 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 ATN1P54259 1190 aaPredicted RBP20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 UBE3CQ15386 1083 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 C20orf194Q5TEA3 1177 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 GPR153Q6NV75 609 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 C16orf86Q6ZW13 317 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 MB21D1Q8N884 522 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 PUS7LQ9H0K6 701 aaKnown RBP20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 ARHGEF10LQ9HCE6 1279 aa20.25■□□□□ 0.83
HDGFL3-203ENST00000563404 MYH8P13535 1937 aa20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 DNM1LO00429 736 aa20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 PLS1Q14651 629 aa20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 GJC2Q5T442 439 aaPredicted RBP20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 ANO1Q5XXA6 986 aa20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 CCDC17Q96LX7 622 aa20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 PARP14Q460N5 1801 aa20.24■□□□□ 0.83
HDGFL3-203ENST00000563404 EEF2P13639 858 aaKnown RBP20.23■□□□□ 0.83
HDGFL3-203ENST00000563404 TMEM132BQ14DG7 1078 aa20.23■□□□□ 0.83
HDGFL3-203ENST00000563404 PRAMEF19Q5SWL8 479 aa20.23■□□□□ 0.83
HDGFL3-203ENST00000563404 NCAPG2Q86XI2 1143 aa20.23■□□□□ 0.83
HDGFL3-203ENST00000563404 DEFB123Q8N688 67 aa20.23■□□□□ 0.83
HDGFL3-203ENST00000563404 MROH8Q9H579 483 aa20.23■□□□□ 0.83
HDGFL3-203ENST00000563404 FBXO28Q9NVF7 368 aa20.23■□□□□ 0.83
HDGFL3-203ENST00000563404 LAMA2P24043 3122 aaKnown RBP20.23■□□□□ 0.83
HDGFL3-203ENST00000563404 WDR46O15213 610 aaKnown RBP20.22■□□□□ 0.83
HDGFL3-203ENST00000563404 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
HDGFL3-203ENST00000563404 ABRAQ8N0Z2 381 aa20.22■□□□□ 0.83
HDGFL3-203ENST00000563404 SLC17A8Q8NDX2 589 aa20.22■□□□□ 0.83
HDGFL3-203ENST00000563404 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.22■□□□□ 0.83
HDGFL3-203ENST00000563404 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
HDGFL3-203ENST00000563404 ADAMTS5Q9UNA0 930 aa20.22■□□□□ 0.83
HDGFL3-203ENST00000563404 MYH7P12883 1935 aa20.21■□□□□ 0.83
HDGFL3-203ENST00000563404 RTP1P59025 263 aa20.21■□□□□ 0.83
HDGFL3-203ENST00000563404 MAML3Q96JK9 1138 aa20.21■□□□□ 0.83
HDGFL3-203ENST00000563404 LRRCC1Q9C099 1032 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms