RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 RPLP1P05386 114 aaKnown RBP6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 NEFMP07197 916 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 TFE3P19532 575 aaPredicted RBP6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 SDSP20132 328 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 MX2P20592 715 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 DGKGP49619 791 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 CASP7P55210 303 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 KRT76Q01546 638 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 LMNB2Q03252 620 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 COBLL1Q53SF7 1204 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 CC2D1AQ6P1N0 951 aaPredicted RBP6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 DDX46Q7L014 1031 aaKnown RBP6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 ZNF438Q7Z4V0 828 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 NECAB2Q7Z6G3 386 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 LRRTM3Q86VH5 581 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 GALNT12Q8IXK2 581 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 CLASRPQ8N2M8 674 aaKnown RBP6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 SVOPQ8N4V2 548 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 USP33Q8TEY7 942 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 ANKRD24Q8TF21 1146 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 TRMT2BQ96GJ1 504 aaKnown RBP6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 SELENOOQ9BVL4 669 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 SPATA9Q9BWV2 254 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 RSPH9Q9H1X1 276 aaPredicted RBP6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 IP6K2Q9UHH9 426 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 TRHDEQ9UKU6 1024 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 HDAC9Q9UKV0 1011 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 PREX2Q70Z35 1606 aa6.37□□□□□ -1.39
VPS35P1-201ENST00000563400 DHX29Q7Z478 1369 aaKnown RBP6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 KLRG2A4D1S0 409 aaPredicted RBP6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 FAM83GA6ND36 823 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 GPR25O00155 361 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 EREGO14944 169 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 ADAMTS2O95450 1211 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 F13A1P00488 732 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 CELA3AP09093 270 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 SLURP2P0DP57 97 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 CCNFP41002 786 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 HIRAP54198 1017 aaPredicted RBP6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 GPSM2P81274 684 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 TOMM20Q15388 145 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 ARSJQ5FYB0 599 aaPredicted RBP6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 GGT6Q6P531 493 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 XKR5Q6UX68 686 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 BNC2Q6ZN30 1099 aaPredicted RBP6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 FAM178BQ8IXR5 827 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 ERP27Q96DN0 273 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 GPR101Q96P66 508 aaPredicted RBP6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 LRRC27Q9C0I9 530 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 CRISPLD1Q9H336 500 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 RUBCNLQ9H714 662 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 FBRSQ9HAH7 460 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 ZDHHC3Q9NYG2 299 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 AKAP2Q9Y2D5 859 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 GJA3Q9Y6H8 435 aa6.36□□□□□ -1.39
VPS35P1-201ENST00000563400 RLBP1P12271 317 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 MAP2K3P46734 347 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 TRIP4Q15650 581 aaPredicted RBP6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 TPTE2Q6XPS3 522 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 GK5Q6ZS86 529 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 NLRP8Q86W28 1048 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 ZBTB38Q8NAP3 1195 aaPredicted RBP6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 PARD3BQ8TEW8 1205 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 COG1Q8WTW3 980 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 L3MBTL2Q969R5 705 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 CAMKK2Q96RR4 588 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 ELAC2Q9BQ52 826 aaKnown RBP6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 HERPUD2Q9BSE4 406 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 CHRDQ9H2X0 955 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 NCOA5Q9HCD5 579 aaKnown RBP6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 PLCB1Q9NQ66 1216 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 RRP7BPQ9NSQ0 103 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 CLIC5Q9NZA1 410 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 MORC2Q9Y6X9 1032 aaPredicted RBP6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 ZFYVE16Q7Z3T8 1539 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 CAMSAP2Q08AD1 1489 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 SHANK2Q9UPX8 1470 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 ARHGEF5Q12774 1597 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 TTC37Q6PGP7 1564 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 DNAJC25-GNG10A0A024R161 153 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 GPR39O43194 453 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 PTMAP06454 111 aaKnown RBP6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 VDRP11473 427 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 CASP2P42575 452 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 CLCQ05315 142 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 CHAF1AQ13111 956 aaPredicted RBP6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 GAS6Q14393 721 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 STAT4Q14765 748 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 TEAD4Q15561 434 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 C1QTNF12Q5T7M4 302 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 BICDL1Q6ZP65 573 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 SV2BQ7L1I2 683 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 ZNF354CQ86Y25 554 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 OR6P1Q8NGX9 317 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 MPP4Q96JB8 637 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 SCLT1Q96NL6 688 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 KIF2CQ99661 725 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 RUSC1Q9BVN2 902 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 CNNM2Q9H8M5 875 aa6.35□□□□□ -1.39
VPS35P1-201ENST00000563400 LATS2Q9NRM7 1088 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms