RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 ATP11BQ9Y2G3 1177 aa11.35□□□□□ -0.59
RPAP1-205ENST00000563293 XIRP2A4UGR9 3374 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 ASNSP08243 561 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 PTPREP23469 700 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 EPHB4P54760 987 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 TTF1Q15361 905 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-205ENST00000563293 ZYXQ15942 572 aaKnown RBP11.34□□□□□ -0.59
RPAP1-205ENST00000563293 TMED8Q6PL24 325 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-205ENST00000563293 CASC1Q6TDU7 716 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 SLC39A5Q6ZMH5 540 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 CCAR1Q8IX12 1150 aaKnown RBP11.34□□□□□ -0.59
RPAP1-205ENST00000563293 OTUD7AQ8TE49 926 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-205ENST00000563293 LPAR1Q92633 364 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 EVI5LQ96CN4 794 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 HAUS7Q99871 368 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 BCL11AQ9H165 835 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 PRDM5Q9NQX1 630 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-205ENST00000563293 SNRKQ9NRH2 765 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 SAP30BPQ9UHR5 308 aaKnown RBP11.34□□□□□ -0.59
RPAP1-205ENST00000563293 ZBTB21Q9ULJ3 1066 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 SMCHD1A6NHR9 2005 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 CHD9Q3L8U1 2897 aa11.34□□□□□ -0.59
RPAP1-205ENST00000563293 MYO9BQ13459 2157 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 HIP1O00291 1037 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 DNM1LO00429 736 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 LDHCP07864 332 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 COL9A1P20849 921 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 ARID4AP29374 1257 aaPredicted RBP11.33□□□□□ -0.6
RPAP1-205ENST00000563293 GSTO1P78417 241 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 TRIM60Q495X7 471 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 PRAMEF19Q5SWL8 479 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 WDR78Q5VTH9 848 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 MFSD14CQ5VZR4 134 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 FLT1P17948 1338 aa11.33□□□□□ -0.6
RPAP1-205ENST00000563293 FOCADQ5VW36 1801 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 SLC15A5A6NIM6 579 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 MAP4K4O95819 1239 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-205ENST00000563293 GH2P01242 217 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 CYBAP13498 195 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 FOSL2P15408 326 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 DYNLL1P63167 89 aaKnown RBP11.32□□□□□ -0.6
RPAP1-205ENST00000563293 ATP2B2Q01814 1243 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 GRB14Q14449 540 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 GRIN2CQ14957 1233 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L2Q6R6M4 530 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 CATSPERGQ6ZRH7 1159 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 FOXP4Q8IVH2 680 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-205ENST00000563293 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 FERMT2Q96AC1 680 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 PDLIM7Q9NR12 457 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 TLR7Q9NYK1 1049 aaKnown RBP11.32□□□□□ -0.6
RPAP1-205ENST00000563293 LRP2BPQ9P2M1 347 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 RABGAP1Q9Y3P9 1069 aa11.32□□□□□ -0.6
RPAP1-205ENST00000563293 NCOR1O75376 2440 aa11.31□□□□□ -0.6
RPAP1-205ENST00000563293 BDP1A6H8Y1 2624 aa11.31□□□□□ -0.6
RPAP1-205ENST00000563293 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
RPAP1-205ENST00000563293 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
RPAP1-205ENST00000563293 HOXC6P09630 235 aa11.31□□□□□ -0.6
RPAP1-205ENST00000563293 PPP4CP60510 307 aa11.31□□□□□ -0.6
RPAP1-205ENST00000563293 SMAD3P84022 425 aaKnown RBP11.31□□□□□ -0.6
RPAP1-205ENST00000563293 DHX36Q9H2U1 1008 aaKnown RBP11.31□□□□□ -0.6
RPAP1-205ENST00000563293 BOLA2Q9H3K6 86 aa11.31□□□□□ -0.6
RPAP1-205ENST00000563293 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
RPAP1-205ENST00000563293 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 COBLO75128 1261 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 CDC45O75419 566 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 GSPT1P15170 499 aaKnown RBP11.3□□□□□ -0.6
RPAP1-205ENST00000563293 VCAM1P19320 739 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 SDSP20132 328 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 SNX17Q15036 470 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-205ENST00000563293 ZSCAN25Q6NSZ9 544 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 SKAP1Q86WV1 359 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 CRACR2BQ8N4Y2 399 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-205ENST00000563293 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
RPAP1-205ENST00000563293 MYH1P12882 1939 aa11.29□□□□□ -0.6
RPAP1-205ENST00000563293 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-205ENST00000563293 CYP2E1P05181 493 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-205ENST00000563293 ZFYP08048 801 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-205ENST00000563293 EVX2Q03828 476 aa11.29□□□□□ -0.6
RPAP1-205ENST00000563293 TLE2Q04725 743 aa11.29□□□□□ -0.6
RPAP1-205ENST00000563293 TATDN1Q6P1N9 297 aa11.29□□□□□ -0.6
RPAP1-205ENST00000563293 GTF3C2Q8WUA4 911 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-205ENST00000563293 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
RPAP1-205ENST00000563293 RILPL2Q969X0 211 aa11.29□□□□□ -0.6
RPAP1-205ENST00000563293 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.29□□□□□ -0.65e-6■■■■■ 34.6
RPAP1-205ENST00000563293 PIH1D3Q9NQM4 214 aaKnown RBP11.29□□□□□ -0.6
RPAP1-205ENST00000563293 TNFRSF10AO00220 468 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms