RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 IFIT1BQ5T764 474 aaKnown RBP17.28■□□□□ 0.36
CDH11-207ENST00000563255 ZNF296Q8WUU4 475 aaPredicted RBP17.28■□□□□ 0.36
CDH11-207ENST00000563255 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
CDH11-207ENST00000563255 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.28■□□□□ 0.36
CDH11-207ENST00000563255 PCDH10Q9P2E7 1040 aa17.28■□□□□ 0.36
CDH11-207ENST00000563255 TPCN1Q9ULQ1 816 aa17.28■□□□□ 0.36
CDH11-207ENST00000563255 PPP1R12BO60237 982 aaPredicted RBP17.27■□□□□ 0.36
CDH11-207ENST00000563255 TTLL1O95922 423 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 GH2P01242 217 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 ASNSP08243 561 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 GUCY1A2P33402 732 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 RCAN1P53805 252 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 JAG1P78504 1218 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 MKL1Q969V6 931 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 TMX3Q96JJ7 454 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 NYAP2Q9P242 653 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 BRPF3Q9ULD4 1205 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.36
CDH11-207ENST00000563255 PTPRFP10586 1907 aa17.27■□□□□ 0.35
CDH11-207ENST00000563255 KLF18A0A0U1RQI7 1052 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
CDH11-207ENST00000563255 SEPT2Q15019 361 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 ME3Q16798 604 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
CDH11-207ENST00000563255 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 SYNE3Q6ZMZ3 975 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 NFXL1Q6ZNB6 911 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
CDH11-207ENST00000563255 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDH11-207ENST00000563255 TMEM47Q9BQJ4 181 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
CDH11-207ENST00000563255 STX8Q9UNK0 236 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 SLC12A7Q9Y666 1083 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 NID2Q14112 1375 aa17.26■□□□□ 0.35
CDH11-207ENST00000563255 GPR25O00155 361 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 PFKFB2O60825 505 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 CALM1P0DP23 149 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 CALM2P0DP24 149 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 CALM3P0DP25 149 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 PDIA3P30101 505 aaKnown RBP17.25■□□□□ 0.35
CDH11-207ENST00000563255 INPP5BP32019 993 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 SREBF2Q12772 1141 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
CDH11-207ENST00000563255 SCYL3Q8IZE3 742 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 ZNF654Q8IZM8 581 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 MAP3K14Q99558 947 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 SYNPO2Q9UMS6 1093 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 FZD1Q9UP38 647 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 HPS5Q9UPZ3 1129 aa17.25■□□□□ 0.35
CDH11-207ENST00000563255 UNCXA6NJT0 531 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 ZBTB43O43298 467 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 LARGE1O95461 756 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
CDH11-207ENST00000563255 IREB2P48200 963 aaKnown RBP17.24■□□□□ 0.35
CDH11-207ENST00000563255 MAP3K9P80192 1104 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 ICA1Q05084 483 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 CUL4AQ13619 759 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 RAB3GAP1Q15042 981 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 PPP2R5BQ15173 497 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 SHROOM1Q2M3G4 852 aaPredicted RBP17.24■□□□□ 0.35
CDH11-207ENST00000563255 LDLRAD1Q5T700 205 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 SLC10A4Q96EP9 437 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
CDH11-207ENST00000563255 SLKQ9H2G2 1235 aaPredicted RBP17.24■□□□□ 0.35
CDH11-207ENST00000563255 CLIP2Q9UDT6 1046 aa17.24■□□□□ 0.35
CDH11-207ENST00000563255 DDAH1O94760 285 aa17.23■□□□□ 0.35
CDH11-207ENST00000563255 TROAPQ12815 778 aa17.23■□□□□ 0.35
CDH11-207ENST00000563255 SPRYD7Q5W111 196 aa17.23■□□□□ 0.35
CDH11-207ENST00000563255 SIAH1Q8IUQ4 282 aa17.23■□□□□ 0.35
CDH11-207ENST00000563255 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
CDH11-207ENST00000563255 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
CDH11-207ENST00000563255 USP17L5A8MUK1 530 aa17.22■□□□□ 0.35
CDH11-207ENST00000563255 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDH11-207ENST00000563255 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.22■□□□□ 0.35
CDH11-207ENST00000563255 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
CDH11-207ENST00000563255 GTF3C6Q969F1 213 aa17.22■□□□□ 0.35
CDH11-207ENST00000563255 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
CDH11-207ENST00000563255 INTS4Q96HW7 963 aaKnown RBP17.22■□□□□ 0.35
CDH11-207ENST00000563255 R3HDMLQ9H3Y0 253 aa17.22■□□□□ 0.35
CDH11-207ENST00000563255 NAP1L2Q9ULW6 460 aaPredicted RBP17.22■□□□□ 0.35
CDH11-207ENST00000563255 GOLGA8BA8MQT2 603 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 FKTNO75072 461 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 PTPRAP18433 802 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 SCRN1Q12765 414 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 STK3Q13188 491 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 CLEC10AQ8IUN9 316 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 FANCBQ8NB91 859 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 AS3MTQ9HBK9 375 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 PICK1Q9NRD5 415 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 TMX2Q9Y320 296 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 PARP14Q460N5 1801 aa17.21■□□□□ 0.35
CDH11-207ENST00000563255 CCDC196A0A1B0GTZ2 297 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 GOLGA8AA7E2F4 631 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms