RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 GPT2Q8TD30 523 aa8.35□□□□□ -1.07
SCAPER-205ENST00000562948 CEP95Q96GE4 821 aa8.35□□□□□ -1.07
SCAPER-205ENST00000562948 CRNKL1Q9BZJ0 848 aaKnown RBP8.35□□□□□ -1.07
SCAPER-205ENST00000562948 CTNNA3Q9UI47 895 aa8.35□□□□□ -1.07
SCAPER-205ENST00000562948 DDX41Q9UJV9 622 aaKnown RBP8.35□□□□□ -1.07
SCAPER-205ENST00000562948 HDLBPQ00341 1268 aaKnown RBP8.35□□□□□ -1.07
SCAPER-205ENST00000562948 NBPF12Q5TAG4 269 aaPredicted RBP8.35□□□□□ -1.07
SCAPER-205ENST00000562948 MOB2Q70IA6 237 aa8.35□□□□□ -1.07
SCAPER-205ENST00000562948 GTF3C6Q969F1 213 aa8.35□□□□□ -1.07
SCAPER-205ENST00000562948 LCTP09848 1927 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 USP5P45974 858 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 PLCB2Q00722 1185 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 NOM1Q5C9Z4 860 aaKnown RBP8.34□□□□□ -1.07
SCAPER-205ENST00000562948 SOGA3Q5TF21 947 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 MFSD6Q6ZSS7 791 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 PHKBQ93100 1093 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 TNRC18O15417 2968 aaPredicted RBP8.34□□□□□ -1.07
SCAPER-205ENST00000562948 ORC4O43929 436 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 GDF11O95390 407 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 PLEKHA8P1O95397 391 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 MBD3O95983 291 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 ECE1P42892 770 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 NSUN7Q8NE18 718 aaKnown RBP8.34□□□□□ -1.07
SCAPER-205ENST00000562948 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 YY1AP1Q9H869 796 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 EFCC1Q9HA90 598 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 SPTLC3Q9NUV7 552 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 USP25Q9UHP3 1055 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 LIMCH1Q9UPQ0 1083 aa8.34□□□□□ -1.07
SCAPER-205ENST00000562948 G3V3G9 751 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 ZKSCAN1P17029 563 aaPredicted RBP8.34□□□□□ -1.08
SCAPER-205ENST00000562948 TFAP4Q01664 338 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 MAP3K10Q02779 954 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 GRIPAP1Q4V328 841 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 DCAF8Q5TAQ9 597 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 ANGEL2Q5VTE6 544 aaKnown RBP8.34□□□□□ -1.08
SCAPER-205ENST00000562948 OTUD7BQ6GQQ9 843 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 TYW1BQ6NUM6 668 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 FAM173BQ6P4H8 233 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 SGMS1Q86VZ5 419 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 NCOA7Q8NI08 942 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 CNKSR2Q8WXI2 1034 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 JDP2Q8WYK2 163 aa8.34□□□□□ -1.08
SCAPER-205ENST00000562948 SYAP1Q96A49 352 aaPredicted RBP8.34□□□□□ -1.08
SCAPER-205ENST00000562948 GEMIN8Q9NWZ8 242 aaKnown RBP8.34□□□□□ -1.08
SCAPER-205ENST00000562948 ARPP21Q9UBL0 812 aaPredicted RBP8.34□□□□□ -1.08
SCAPER-205ENST00000562948 ADM5C9JUS6 153 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 WNT7AO00755 349 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 CTIFO43310 598 aaKnown RBP8.33□□□□□ -1.08
SCAPER-205ENST00000562948 RASA3Q14644 834 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 NPY5RQ15761 445 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 DPF2Q92785 391 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 FEZ2Q9UHY8 353 aaPredicted RBP8.33□□□□□ -1.08
SCAPER-205ENST00000562948 MYCNP04198 464 aaPredicted RBP8.33□□□□□ -1.08
SCAPER-205ENST00000562948 NCBP1Q09161 790 aaKnown RBP8.33□□□□□ -1.08
SCAPER-205ENST00000562948 ZSCAN10Q96SZ4 725 aaPredicted RBP8.33□□□□□ -1.08
SCAPER-205ENST00000562948 RBAK-RBAKDNI3L0D1 243 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 GSTO1P78417 241 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 PKN1Q16512 942 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 BCCIPQ9P287 314 aaKnown RBP eCLIP8.33□□□□□ -1.08
SCAPER-205ENST00000562948 RSPH14Q9UHP6 348 aa8.33□□□□□ -1.08
SCAPER-205ENST00000562948 ANGEL1Q9UNK9 670 aaKnown RBP8.33□□□□□ -1.08
SCAPER-205ENST00000562948 NID2Q14112 1375 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 COL2A1P02458 1487 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 KLF18A0A0U1RQI7 1052 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 PFKFB2O60825 505 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 BAG3O95817 575 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 GOLGA8HP0CJ92 632 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 MMP14P50281 582 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 SRBD1Q8N5C6 995 aaKnown RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 SMARCC2Q8TAQ2 1214 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 CSRNP1Q96S65 589 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 DEFB129Q9H1M3 183 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 MAD2L2Q9UI95 211 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 SERPINB13Q9UIV8 391 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 MORC2Q9Y6X9 1032 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 USP34Q70CQ2 3546 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 PEX10O60683 326 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 GTF2A1P52655 376 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 GPR162Q16538 588 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 KIF4BQ2VIQ3 1234 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 EARS2Q5JPH6 523 aaKnown RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 CDC37L1Q7L3B6 337 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 ACER1Q8TDN7 264 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 FOXD4L4Q8WXT5 416 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 ZKSCAN4Q969J2 545 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 R3HDMLQ9H3Y0 253 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 VEZTQ9HBM0 779 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 GGA3Q9NZ52 723 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 PLIN4Q96Q06 1357 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 TRAF5O00463 557 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 ADCY5O95622 1261 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 DLGAP5Q15398 846 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 AXDND1Q5T1B0 1012 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 MICU3Q86XE3 530 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 CNPY4Q8N129 248 aa8.32□□□□□ -1.08
SCAPER-205ENST00000562948 TMEM47Q9BQJ4 181 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms