RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 SAMD1Q6SPF0 538 aaPredicted RBP18.89■□□□□ 0.61
SF3B3-203ENST00000562874 PLEKHH3Q7Z736 793 aa18.89■□□□□ 0.61
SF3B3-203ENST00000562874 DIS3LQ8TF46 1054 aaKnown RBP18.89■□□□□ 0.61
SF3B3-203ENST00000562874 STRBPQ96SI9 672 aaKnown RBP18.89■□□□□ 0.61
SF3B3-203ENST00000562874 ARHGEF10LQ9HCE6 1279 aa18.89■□□□□ 0.61
SF3B3-203ENST00000562874 EPB41L4AQ9HCS5 686 aaPredicted RBP18.89■□□□□ 0.61
SF3B3-203ENST00000562874 RABGAP1Q9Y3P9 1069 aa18.89■□□□□ 0.61
SF3B3-203ENST00000562874 LAMA4Q16363 1823 aa18.88■□□□□ 0.61
SF3B3-203ENST00000562874 H0YGN5 161 aa18.88■□□□□ 0.61
SF3B3-203ENST00000562874 RNF113AO15541 343 aaKnown RBP18.88■□□□□ 0.61
SF3B3-203ENST00000562874 TFRCP02786 760 aaKnown RBP18.88■□□□□ 0.61
SF3B3-203ENST00000562874 PRKAR2AP13861 404 aaKnown RBP18.88■□□□□ 0.61
SF3B3-203ENST00000562874 ZKSCAN1P17029 563 aaPredicted RBP18.88■□□□□ 0.61
SF3B3-203ENST00000562874 SIAH1Q8IUQ4 282 aa18.88■□□□□ 0.61
SF3B3-203ENST00000562874 DPF3Q92784 378 aa18.88■□□□□ 0.61
SF3B3-203ENST00000562874 SEC62Q99442 399 aaKnown RBP18.88■□□□□ 0.61
SF3B3-203ENST00000562874 TTC41PQ6P2S7 1318 aa18.88■□□□□ 0.61
SF3B3-203ENST00000562874 SMCHD1A6NHR9 2005 aa18.87■□□□□ 0.61
SF3B3-203ENST00000562874 GSG1L2A8MUP6 293 aa18.87■□□□□ 0.61
SF3B3-203ENST00000562874 MINDY4BA8MYZ0 360 aa18.87■□□□□ 0.61
SF3B3-203ENST00000562874 MX1P20591 662 aa18.87■□□□□ 0.61
SF3B3-203ENST00000562874 MORN1Q5T089 497 aa18.87■□□□□ 0.61
SF3B3-203ENST00000562874 ROBO3Q96MS0 1386 aa18.87■□□□□ 0.61
SF3B3-203ENST00000562874 APBA2Q99767 749 aa18.87■□□□□ 0.61
SF3B3-203ENST00000562874 FSD1Q9BTV5 496 aa18.87■□□□□ 0.61
SF3B3-203ENST00000562874 HMX1Q9NP08 348 aaPredicted RBP18.87■□□□□ 0.61
SF3B3-203ENST00000562874 RPTORQ8N122 1335 aa18.86■□□□□ 0.61
SF3B3-203ENST00000562874 EEF2P13639 858 aaKnown RBP18.86■□□□□ 0.61
SF3B3-203ENST00000562874 RGS2P41220 211 aa18.86■□□□□ 0.61
SF3B3-203ENST00000562874 CCNA1P78396 465 aa18.86■□□□□ 0.61
SF3B3-203ENST00000562874 LBX2Q6XYB7 198 aa18.86■□□□□ 0.61
SF3B3-203ENST00000562874 USP6NLQ92738 828 aa18.86■□□□□ 0.61
SF3B3-203ENST00000562874 CRISPLD2Q9H0B8 497 aa18.86■□□□□ 0.61
SF3B3-203ENST00000562874 VCPKMTQ9H867 229 aa18.86■□□□□ 0.61
SF3B3-203ENST00000562874 SALL3Q9BXA9 1300 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 ERC2O15083 957 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 RAD21O60216 631 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 TDO2P48775 406 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 MAP2K5Q13163 448 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 GCC1Q96CN9 775 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 ATG4CQ96DT6 458 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 CCDC17Q96LX7 622 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 HTATIP2Q9BUP3 242 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 TMX2Q9Y320 296 aa18.85■□□□□ 0.61
SF3B3-203ENST00000562874 FLOT1O75955 427 aa18.84■□□□□ 0.61
SF3B3-203ENST00000562874 GLRX3O76003 335 aaKnown RBP18.84■□□□□ 0.61
SF3B3-203ENST00000562874 ZFYP08048 801 aaPredicted RBP18.84■□□□□ 0.61
SF3B3-203ENST00000562874 XRCC5P13010 732 aaKnown RBP18.84■□□□□ 0.61
SF3B3-203ENST00000562874 RASA1P20936 1047 aa18.84■□□□□ 0.61
SF3B3-203ENST00000562874 CCND3P30281 292 aaPredicted RBP18.84■□□□□ 0.61
SF3B3-203ENST00000562874 HABP4Q5JVS0 413 aaKnown RBP18.84■□□□□ 0.61
SF3B3-203ENST00000562874 MAP3K21Q5TCX8 1036 aa18.84■□□□□ 0.61
SF3B3-203ENST00000562874 ANKRD45Q5TZF3 282 aa18.84■□□□□ 0.61
SF3B3-203ENST00000562874 PAWRQ96IZ0 340 aaKnown RBP18.84■□□□□ 0.61
SF3B3-203ENST00000562874 SH2D4AQ9H788 454 aa18.84■□□□□ 0.61
SF3B3-203ENST00000562874 FLRT1Q9NZU1 646 aa18.84■□□□□ 0.61
SF3B3-203ENST00000562874 PRDM1O75626 825 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 APPP05067 770 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 PTPREP23469 700 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 CACNB2Q08289 660 aaPredicted RBP18.83■□□□□ 0.6
SF3B3-203ENST00000562874 PLS1Q14651 629 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 COG2Q14746 738 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 SBK1Q52WX2 424 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 CCDC129Q6ZRS4 1044 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 LPAR1Q92633 364 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.83■□□□□ 0.6
SF3B3-203ENST00000562874 MOV10L1Q9BXT6 1211 aaKnown RBP18.83■□□□□ 0.6
SF3B3-203ENST00000562874 FBXO28Q9NVF7 368 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 COLQQ9Y215 455 aaPredicted RBP18.83■□□□□ 0.6
SF3B3-203ENST00000562874 IVNS1ABPQ9Y6Y0 642 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 TRIOBPQ9H2D6 2365 aa18.83■□□□□ 0.6
SF3B3-203ENST00000562874 WDR46O15213 610 aaKnown RBP18.82■□□□□ 0.6
SF3B3-203ENST00000562874 DSG3P32926 999 aa18.82■□□□□ 0.6
SF3B3-203ENST00000562874 GRB14Q14449 540 aa18.82■□□□□ 0.6
SF3B3-203ENST00000562874 NPLOC4Q8TAT6 608 aa18.82■□□□□ 0.6
SF3B3-203ENST00000562874 SPATC1LQ9H0A9 340 aa18.82■□□□□ 0.6
SF3B3-203ENST00000562874 MKNK2Q9HBH9 465 aa18.82■□□□□ 0.6
SF3B3-203ENST00000562874 SLC15A5A6NIM6 579 aa18.81■□□□□ 0.6
SF3B3-203ENST00000562874 FAM83BQ5T0W9 1011 aa18.81■□□□□ 0.6
SF3B3-203ENST00000562874 CHRDL2Q6WN34 429 aa18.81■□□□□ 0.6
SF3B3-203ENST00000562874 NUP88Q99567 741 aaPredicted RBP18.81■□□□□ 0.6
SF3B3-203ENST00000562874 KANSL2Q9H9L4 492 aa18.81■□□□□ 0.6
SF3B3-203ENST00000562874 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
SF3B3-203ENST00000562874 LCTP09848 1927 aa18.8■□□□□ 0.6
SF3B3-203ENST00000562874 GNAT2P19087 354 aa18.8■□□□□ 0.6
SF3B3-203ENST00000562874 ERCC3P19447 782 aa18.8■□□□□ 0.6
SF3B3-203ENST00000562874 MNX1P50219 401 aaPredicted RBP18.8■□□□□ 0.6
SF3B3-203ENST00000562874 ZMYM1Q5SVZ6 1142 aa18.8■□□□□ 0.6
SF3B3-203ENST00000562874 GIMAP6Q6P9H5 292 aa18.8■□□□□ 0.6
SF3B3-203ENST00000562874 TRMT44Q8IYL2 757 aaKnown RBP18.8■□□□□ 0.6
SF3B3-203ENST00000562874 IFNL3Q8IZI9 196 aa18.8■□□□□ 0.6
SF3B3-203ENST00000562874 GOPCQ9HD26 462 aa18.8■□□□□ 0.6
SF3B3-203ENST00000562874 HOXC10Q9NYD6 342 aa18.8■□□□□ 0.6
SF3B3-203ENST00000562874 LTBP2Q14767 1821 aa18.79■□□□□ 0.6
SF3B3-203ENST00000562874 MYH6P13533 1939 aa18.79■□□□□ 0.6
SF3B3-203ENST00000562874 ADORA2AP29274 412 aa18.79■□□□□ 0.6
SF3B3-203ENST00000562874 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
SF3B3-203ENST00000562874 LRRFIP1Q32MZ4 808 aaKnown RBP18.79■□□□□ 0.6
SF3B3-203ENST00000562874 NECAB2Q7Z6G3 386 aa18.79■□□□□ 0.6
SF3B3-203ENST00000562874 NCAPG2Q86XI2 1143 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms