RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ARPP21Q9UBL0 812 aaPredicted RBP12.44□□□□□ -0.42
RPAP1-204ENST00000562303 CYP2J2P51589 502 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 MAIP1Q8WWC4 291 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 GCKRQ14397 625 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 PEX26Q7Z412 305 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 ARHGEF2Q92974 986 aaKnown RBP12.43□□□□□ -0.42
RPAP1-204ENST00000562303 BLZF1Q9H2G9 400 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 KRT40Q6A162 431 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 ANKRD35Q8N283 1001 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 KBTBD3Q8NAB2 608 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 RPS6KA1Q15418 735 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 C2CD5Q86YS7 1000 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 SMC5Q8IY18 1101 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 ATP8A2Q9NTI2 1148 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 VPS54Q9P1Q0 977 aa12.43□□□□□ -0.42
RPAP1-204ENST00000562303 RLBP1P12271 317 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPAP1-204ENST00000562303 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
RPAP1-204ENST00000562303 ATP2A3Q93084 1043 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 ORAI2Q96SN7 254 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 PSMB7Q99436 277 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 KDM3AQ9Y4C1 1321 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 RPS6KA2Q15349 733 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 XKR9Q5GH70 373 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 CROCCP2Q86T23 111 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 RSRC1Q96IZ7 334 aaKnown RBP12.42□□□□□ -0.42
RPAP1-204ENST00000562303 RBSNQ9H1K0 784 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 LGR6Q9HBX8 967 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 SNX14Q9Y5W7 946 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 NDUFB9Q9Y6M9 179 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 PPARAQ07869 468 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 TUBB2AQ13885 445 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 POSTNQ15063 836 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 TUBB2BQ9BVA1 445 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 SUGCTQ9HAC7 445 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 DUOX2Q9NRD8 1548 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 STAM2O75886 525 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 POLR2MP0CAP2 368 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 GPBP1Q86WP2 473 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 VSIG1Q86XK7 387 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 CTAGE3PQ8IX95 158 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 MRPL11Q9Y3B7 192 aaKnown RBP12.42□□□□□ -0.42
RPAP1-204ENST00000562303 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
RPAP1-204ENST00000562303 ZNF202O95125 648 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 NLRP12P59046 1061 aa12.42□□□□□ -0.42
RPAP1-204ENST00000562303 EIF4G3O43432 1585 aaKnown RBP12.41□□□□□ -0.42
RPAP1-204ENST00000562303 TTC31Q49AM3 519 aaPredicted RBP12.41□□□□□ -0.42
RPAP1-204ENST00000562303 PRR16Q569H4 304 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 TMTC1Q8IUR5 882 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 CEP120Q8N960 986 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 STAMQ92783 540 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 RAB20Q9NX57 234 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 A0A1W2PP64 1363 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 U2AF1L4Q8WU68 220 aaKnown RBP12.41□□□□□ -0.42
RPAP1-204ENST00000562303 LSM14BQ9BX40 385 aaKnown RBP12.41□□□□□ -0.42
RPAP1-204ENST00000562303 SEPT10Q9P0V9 454 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 HOXB7P09629 217 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 IGBP1P78318 339 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 FLAD1Q8NFF5 587 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
RPAP1-204ENST00000562303 FEZ2Q9UHY8 353 aaPredicted RBP12.41□□□□□ -0.42
RPAP1-204ENST00000562303 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
RPAP1-204ENST00000562303 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 ZNF518AQ6AHZ1 1483 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 GNA14O95837 355 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 SCNN1DP51172 638 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 PPARDQ03181 441 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 VCXQ9H320 206 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 PSTPIP2Q9H939 334 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 NLRC4Q9NPP4 1024 aa12.41□□□□□ -0.42
RPAP1-204ENST00000562303 FAM207AQ9NSI2 230 aaPredicted RBP12.41□□□□□ -0.42
RPAP1-204ENST00000562303 PCK1P35558 622 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 LONRF2Q1L5Z9 754 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 B4GALNT4Q76KP1 1039 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
RPAP1-204ENST00000562303 MIPOL1Q8TD10 442 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 RILPQ96NA2 401 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 HESX1Q9UBX0 185 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 SBNO1A3KN83 1393 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 GBP1P32455 592 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
RPAP1-204ENST00000562303 MCF2L2Q86YR7 1114 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 TBX22Q9Y458 520 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 PDZD4Q76G19 769 aaPredicted RBP12.4□□□□□ -0.42
RPAP1-204ENST00000562303 KIAA0825Q8IV33 1275 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms