RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HSP90B2PQ58FF3 399 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 EARS2Q5JPH6 523 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 RRAGBQ5VZM2 374 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 SH3RF1Q7Z6J0 888 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 RNF26Q9BY78 433 aaPredicted RBP15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 GBP3Q9H0R5 595 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 BLZF1Q9H2G9 400 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 CDC25AP30304 524 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 ERVK-24P63145 666 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 SLC20A2Q08357 652 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 KRT31Q15323 416 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 WHAMMP3Q1A5X7 153 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 ANKRD20A12PQ8NF67 263 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 SLF1Q9BQI6 1058 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 FAN1Q9Y2M0 1017 aa15.81■□□□□ 0.12
VPS9D1-202ENST00000561976 LRP6O75581 1613 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 TNS2Q63HR2 1409 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 SPATA31A3Q5VYP0 1347 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 CYP26C1Q6V0L0 522 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 ZFP91Q96JP5 570 aaPredicted RBP15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 ABHD10Q9NUJ1 306 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 TAB2Q9NYJ8 693 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 TNKSO95271 1327 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 ITIH6Q6UXX5 1313 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 MROH5Q6ZUA9 1318 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 PHACTR2O75167 634 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 CASP8Q14790 479 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 C10orf67Q8IYJ2 551 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 BRMS1Q9HCU9 246 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 LRP2BPQ9P2M1 347 aa15.8■□□□□ 0.12
VPS9D1-202ENST00000561976 PPARAQ07869 468 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 DNAJC5Q9H3Z4 198 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 V9GY48 417 aaPredicted RBP15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 BMP15O95972 392 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 FGFR2P21802 821 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 KRT9P35527 623 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 SHISA4Q96DD7 197 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 RASSF4Q9H2L5 321 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 MYO6Q9UM54 1294 aa15.79■□□□□ 0.12
VPS9D1-202ENST00000561976 RTL9Q8NET4 1388 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 MYO1CO00159 1063 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 WNT7AO00755 349 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 COPB1P53618 953 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 RCAN1P53805 252 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 NCAPH2Q6IBW4 605 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 ESR2Q92731 530 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 PHF20Q9BVI0 1012 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 GUCA1BQ9UMX6 200 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 CHD4Q14839 1912 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 RNF225M0QZC1 329 aaPredicted RBP15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 TNNT3P45378 269 aaPredicted RBP15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 PTGDRQ13258 359 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 TTC38Q5R3I4 469 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 NOA1Q8NC60 698 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 MTA3Q9BTC8 594 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 ACBD3Q9H3P7 528 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 MYO1AQ9UBC5 1043 aa15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 LIMA1Q9UHB6 759 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-202ENST00000561976 ARHGAP25P42331 645 aa15.77■□□□□ 0.12
VPS9D1-202ENST00000561976 SPAG1Q07617 926 aa15.77■□□□□ 0.12
VPS9D1-202ENST00000561976 PAK1Q13153 545 aa15.77■□□□□ 0.12
VPS9D1-202ENST00000561976 PKN1Q16512 942 aa15.77■□□□□ 0.12
VPS9D1-202ENST00000561976 IQUBQ8NA54 791 aa15.77■□□□□ 0.12
VPS9D1-202ENST00000561976 SDR42E1Q8WUS8 393 aa15.77■□□□□ 0.12
VPS9D1-202ENST00000561976 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
VPS9D1-202ENST00000561976 PNPLA7Q6ZV29 1317 aa15.77■□□□□ 0.12
VPS9D1-202ENST00000561976 PES1O00541 588 aaKnown RBP15.77■□□□□ 0.11
VPS9D1-202ENST00000561976 TRIM66O15016 1216 aa15.77■□□□□ 0.11
VPS9D1-202ENST00000561976 IVLP07476 585 aa15.77■□□□□ 0.11
VPS9D1-202ENST00000561976 FECHP22830 423 aa15.77■□□□□ 0.11
VPS9D1-202ENST00000561976 BCAMP50895 628 aa15.77■□□□□ 0.11
VPS9D1-202ENST00000561976 NOM1Q5C9Z4 860 aaKnown RBP15.77■□□□□ 0.11
VPS9D1-202ENST00000561976 CCDC148Q8NFR7 591 aa15.77■□□□□ 0.11
VPS9D1-202ENST00000561976 MAPK8IP1Q9UQF2 711 aa15.77■□□□□ 0.11
VPS9D1-202ENST00000561976 KCNJ18B7U540 433 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 TUBBP07437 444 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 UBXN1Q04323 297 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 TRIM14Q14142 442 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 KCNJ12Q14500 433 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 PPP2R5BQ15173 497 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 CATIPQ7Z7H3 387 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 NELFBQ8WX92 580 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 PIGBQ92521 554 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 RWDD2AQ9UIY3 292 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 RRP15Q9Y3B9 282 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 XDHP47989 1333 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 CYP7A1P22680 504 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 TCP11X2Q5H9J9 407 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 IFIT1BQ5T764 474 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 FAM71BQ8TC56 605 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 CHP1Q99653 195 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 PAPPAQ13219 1627 aa15.76■□□□□ 0.11
VPS9D1-202ENST00000561976 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 EVA1CP58658 441 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 SEC23AQ15436 765 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 SRLQ86TD4 932 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms