RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 VCPKMTQ9H867 229 aa27.68■■■□□ 2.02
SMPD3-202ENST00000561749 MTMR4Q9NYA4 1195 aa27.68■■■□□ 2.02
SMPD3-202ENST00000561749 MGAMO43451 1857 aa27.68■■■□□ 2.02
SMPD3-202ENST00000561749 PARP14Q460N5 1801 aa27.67■■■□□ 2.02
SMPD3-202ENST00000561749 LRRC47Q8N1G4 583 aaKnown RBP27.67■■■□□ 2.02
SMPD3-202ENST00000561749 P2RX7Q99572 595 aaKnown RBP27.67■■■□□ 2.02
SMPD3-202ENST00000561749 LSG1Q9H089 658 aaKnown RBP27.67■■■□□ 2.02
SMPD3-202ENST00000561749 ANO2Q9NQ90 1003 aa27.67■■■□□ 2.02
SMPD3-202ENST00000561749 IL17RBQ9NRM6 502 aa27.67■■■□□ 2.02
SMPD3-202ENST00000561749 RBM8AQ9Y5S9 174 aaKnown RBP27.67■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L15C9J2P7 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L13C9JLJ4 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L11C9JVI0 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L18D6R9N7 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L22D6RA61 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L17D6RBQ6 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L19D6RCP7 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L20D6RJB6 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 USP17L24Q0WX57 530 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 MAP4K1Q92918 833 aa27.66■■■□□ 2.02
SMPD3-202ENST00000561749 RLFQ13129 1914 aa27.65■■■□□ 2.02
SMPD3-202ENST00000561749 TTLL1O95922 423 aa27.65■■■□□ 2.02
SMPD3-202ENST00000561749 BCRP11274 1271 aa27.65■■■□□ 2.02
SMPD3-202ENST00000561749 CAP1Q01518 475 aa27.65■■■□□ 2.02
SMPD3-202ENST00000561749 CATSPERGQ6ZRH7 1159 aa27.65■■■□□ 2.02
SMPD3-202ENST00000561749 ANKRD13CQ8N6S4 541 aa27.65■■■□□ 2.02
SMPD3-202ENST00000561749 TANGO6Q9C0B7 1094 aa27.65■■■□□ 2.02
SMPD3-202ENST00000561749 GOPCQ9HD26 462 aa27.65■■■□□ 2.02
SMPD3-202ENST00000561749 B4E1Z4 1266 aa27.64■■■□□ 2.02
SMPD3-202ENST00000561749 PEX10O60683 326 aa27.64■■■□□ 2.02
SMPD3-202ENST00000561749 CYP21A2P08686 494 aa27.64■■■□□ 2.02
SMPD3-202ENST00000561749 PCP11498 1178 aaKnown RBP27.64■■■□□ 2.02
SMPD3-202ENST00000561749 ERO1AQ96HE7 468 aa27.64■■■□□ 2.02
SMPD3-202ENST00000561749 STX8Q9UNK0 236 aa27.64■■■□□ 2.02
SMPD3-202ENST00000561749 TAF6LQ9Y6J9 622 aa27.64■■■□□ 2.02
SMPD3-202ENST00000561749 KDM4AO75164 1064 aa27.63■■■□□ 2.01
SMPD3-202ENST00000561749 HERVK_113P62684 666 aa27.63■■■□□ 2.01
SMPD3-202ENST00000561749 LPAR1Q92633 364 aa27.63■■■□□ 2.01
SMPD3-202ENST00000561749 ESR2Q92731 530 aa27.63■■■□□ 2.01
SMPD3-202ENST00000561749 CHMP4CQ96CF2 233 aa27.63■■■□□ 2.01
SMPD3-202ENST00000561749 ARHGAP39Q9C0H5 1083 aa27.63■■■□□ 2.01
SMPD3-202ENST00000561749 SAMD1Q6SPF0 538 aaPredicted RBP27.62■■■□□ 2.01
SMPD3-202ENST00000561749 NUP88Q99567 741 aaPredicted RBP27.62■■■□□ 2.01
SMPD3-202ENST00000561749 ZKSCAN3Q9BRR0 538 aa27.62■■■□□ 2.01
SMPD3-202ENST00000561749 F5H6K3 240 aa27.61■■■□□ 2.01
SMPD3-202ENST00000561749 NDUFB10O96000 172 aa27.61■■■□□ 2.01
SMPD3-202ENST00000561749 LACTBP83111 547 aaPredicted RBP27.61■■■□□ 2.01
SMPD3-202ENST00000561749 KLRC3Q07444 240 aa27.61■■■□□ 2.01
SMPD3-202ENST00000561749 FAM83BQ5T0W9 1011 aa27.61■■■□□ 2.01
SMPD3-202ENST00000561749 CTU1Q7Z7A3 348 aaKnown RBP27.61■■■□□ 2.01
SMPD3-202ENST00000561749 MKL1Q969V6 931 aa27.61■■■□□ 2.01
SMPD3-202ENST00000561749 COL11A1P12107 1806 aaPredicted RBP27.6■■■□□ 2.01
SMPD3-202ENST00000561749 WDR46O15213 610 aaKnown RBP27.6■■■□□ 2.01
SMPD3-202ENST00000561749 GCLCP48506 637 aaPredicted RBP27.6■■■□□ 2.01
SMPD3-202ENST00000561749 PAGR1Q9BTK6 254 aa27.6■■■□□ 2.01
SMPD3-202ENST00000561749 MTMR7Q9Y216 660 aa27.6■■■□□ 2.01
SMPD3-202ENST00000561749 TRIM17Q9Y577 477 aa27.6■■■□□ 2.01
SMPD3-202ENST00000561749 CTGFP29279 349 aa27.59■■■□□ 2.01
SMPD3-202ENST00000561749 KIF22Q14807 665 aa27.59■■■□□ 2.01
SMPD3-202ENST00000561749 POTEEQ6S8J3 1075 aa27.59■■■□□ 2.01
SMPD3-202ENST00000561749 TNS4Q8IZW8 715 aa27.59■■■□□ 2.01
SMPD3-202ENST00000561749 KRT23Q9C075 422 aa27.59■■■□□ 2.01
SMPD3-202ENST00000561749 TXNRD2Q9NNW7 524 aa27.59■■■□□ 2.01
SMPD3-202ENST00000561749 SPDYE16A6NNV3 312 aaPredicted RBP27.58■■■□□ 2.01
SMPD3-202ENST00000561749 FLOT1O75955 427 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 PPP4R3BQ5MIZ7 849 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 SLFN13Q68D06 897 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 STOX1Q6ZVD7 989 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 OTOP1Q7RTM1 612 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 CNNM2Q9H8M5 875 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 EFCC1Q9HA90 598 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 TCP11L1Q9NUJ3 509 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 FBXO28Q9NVF7 368 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 A0A0G2JMZ2 1700 aa27.58■■■□□ 2.01
SMPD3-202ENST00000561749 DOCK3Q8IZD9 2030 aa27.57■■■□□ 2
SMPD3-202ENST00000561749 E7EWF7 191 aa27.57■■■□□ 2
SMPD3-202ENST00000561749 PSMC4P43686 418 aa27.57■■■□□ 2
SMPD3-202ENST00000561749 FAM110CQ1W6H9 321 aa27.57■■■□□ 2
SMPD3-202ENST00000561749 MCOLN1Q9GZU1 580 aa27.57■■■□□ 2
SMPD3-202ENST00000561749 ZSWIM5Q9P217 1185 aa27.57■■■□□ 2
SMPD3-202ENST00000561749 RBPJLQ9UBG7 517 aa27.57■■■□□ 2
SMPD3-202ENST00000561749 ISY1Q9ULR0 285 aaKnown RBP27.57■■■□□ 2
SMPD3-202ENST00000561749 SLC27A2O14975 620 aa27.56■■■□□ 2
SMPD3-202ENST00000561749 COG2Q14746 738 aa27.56■■■□□ 2
SMPD3-202ENST00000561749 RASGRP2Q7LDG7 609 aa27.56■■■□□ 2
SMPD3-202ENST00000561749 GMCL1P1Q8NEA9 526 aa27.56■■■□□ 2
SMPD3-202ENST00000561749 TMEM47Q9BQJ4 181 aa27.56■■■□□ 2
SMPD3-202ENST00000561749 FMNL1O95466 1100 aaPredicted RBP27.55■■■□□ 2
SMPD3-202ENST00000561749 NOVP48745 357 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 TRDNQ13061 729 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 CREB3L3Q68CJ9 461 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 RCSD1Q6JBY9 416 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 CYB5R4Q7L1T6 521 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 ATG4CQ96DT6 458 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 TRIM47Q96LD4 638 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 MORF4L1Q9UBU8 362 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 SYNPO2Q9UMS6 1093 aa27.55■■■□□ 2
SMPD3-202ENST00000561749 CNMDO75829 334 aa27.54■■■□□ 2
SMPD3-202ENST00000561749 TOP1P11387 765 aaKnown RBP27.54■■■□□ 2
SMPD3-202ENST00000561749 DSG3P32926 999 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms