RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 CALM3P0DP25 149 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 GJB2P29033 226 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 ECE1P42892 770 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 MAP3K9P80192 1104 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 GRM4Q14833 912 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 NTRK3Q16288 839 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 USP17L2Q6R6M4 530 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 CCDC82Q8N4S0 544 aa14.97□□□□□ -0.01
COTL1-202ENST00000561707 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.97□□□□□ -0.01
COTL1-202ENST00000561707 PLEKHA8P1O95397 391 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 ASNSP08243 561 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 GOLGA8HP0CJ92 632 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 DDIT3P35638 169 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 TTLL12Q14166 644 aaPredicted RBP14.96□□□□□ -0.01
COTL1-202ENST00000561707 KIAA1755Q5JYT7 1200 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 SLFN13Q68D06 897 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.96□□□□□ -0.01
COTL1-202ENST00000561707 SRBD1Q8N5C6 995 aaKnown RBP14.96□□□□□ -0.01
COTL1-202ENST00000561707 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.96□□□□□ -0.01
COTL1-202ENST00000561707 SMARCC2Q8TAQ2 1214 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 PHKBQ93100 1093 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 LLPHQ9BRT6 129 aaKnown RBP14.96□□□□□ -0.01
COTL1-202ENST00000561707 GPCPD1Q9NPB8 672 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.01
COTL1-202ENST00000561707 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 PTPDC1A2A3K4 754 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 PALM3A6NDB9 673 aaPredicted RBP14.95□□□□□ -0.02
COTL1-202ENST00000561707 UBE2Q2LH0YL09 131 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 CPLX1O14810 134 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 RAD21O60216 631 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 PPP1R12BO60237 982 aaPredicted RBP14.95□□□□□ -0.02
COTL1-202ENST00000561707 FDPSP14324 419 aaKnown RBP14.95□□□□□ -0.02
COTL1-202ENST00000561707 NF2P35240 595 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 RCAN1P53805 252 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 SLC35G1Q2M3R5 365 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 PPP4R3BQ5MIZ7 849 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 TTBK2Q6IQ55 1244 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 NBPF11Q86T75 865 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 SCYL3Q8IZE3 742 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
COTL1-202ENST00000561707 CPVLQ9H3G5 476 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 ZNF408Q9H9D4 720 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 ARHGEF10LQ9HCE6 1279 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 CWC22Q9HCG8 908 aaKnown RBP14.95□□□□□ -0.02
COTL1-202ENST00000561707 GINM1Q9NU53 330 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 NID2Q14112 1375 aa14.95□□□□□ -0.02
COTL1-202ENST00000561707 FRMPD2Q68DX3 1309 aaPredicted RBP14.94□□□□□ -0.02
COTL1-202ENST00000561707 MYH6P13533 1939 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 hCG_1642624A0A1W2PR95 340 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 F5H6K3 240 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 DHX16O60231 1041 aaKnown RBP14.94□□□□□ -0.02
COTL1-202ENST00000561707 PDHBP11177 359 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 PTPRAP18433 802 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 FOSBP53539 338 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 KLRC3Q07444 240 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 FUT2Q10981 343 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 ZYXQ15942 572 aaKnown RBP14.94□□□□□ -0.02
COTL1-202ENST00000561707 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 TMTC3Q6ZXV5 915 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 MAP3K14Q99558 947 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 NUP88Q99567 741 aaPredicted RBP14.94□□□□□ -0.02
COTL1-202ENST00000561707 UBA5Q9GZZ9 404 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 RBM28Q9NW13 759 aaKnown RBP14.94□□□□□ -0.02
COTL1-202ENST00000561707 ORC3Q9UBD5 711 aaPredicted RBP14.94□□□□□ -0.02
COTL1-202ENST00000561707 TMX2Q9Y320 296 aa14.94□□□□□ -0.02
COTL1-202ENST00000561707 CCDC196A0A1B0GTZ2 297 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 ITGBL1O95965 494 aaPredicted RBP14.93□□□□□ -0.02
COTL1-202ENST00000561707 NDUFB10O96000 172 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 PARP1P09874 1014 aaKnown RBP14.93□□□□□ -0.02
COTL1-202ENST00000561707 IFNAR1P17181 557 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 KIF5BP33176 963 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 IREB2P48200 963 aaKnown RBP14.93□□□□□ -0.02
COTL1-202ENST00000561707 SSRP1Q08945 709 aaKnown RBP14.93□□□□□ -0.02
COTL1-202ENST00000561707 PPP2R5BQ15173 497 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 NOL9Q5SY16 702 aaKnown RBP14.93□□□□□ -0.02
COTL1-202ENST00000561707 KCTD1Q719H9 257 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 PIBF1Q8WXW3 757 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 CLMNQ96JQ2 1002 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 SLC26A6Q9BXS9 759 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 PICK1Q9NRD5 415 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 SNCAIPQ9Y6H5 919 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 ZHX2Q9Y6X8 837 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 V9GY48 417 aaPredicted RBP14.93□□□□□ -0.02
COTL1-202ENST00000561707 PHIPQ8WWQ0 1821 aa14.93□□□□□ -0.02
COTL1-202ENST00000561707 KLRF2D3W0D1 207 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 SNHG28P0DPA3 235 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 ZNF543Q08ER8 600 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 SPP2Q13103 211 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 DGKZQ13574 1117 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 PKP1Q13835 747 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 VGLL4Q14135 290 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 CCDC96Q2M329 555 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 CPLX2Q6PUV4 134 aaKnown RBP14.92□□□□□ -0.02
COTL1-202ENST00000561707 ARMC9Q7Z3E5 817 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 SPICE1Q8N0Z3 855 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 GMCL1P1Q8NEA9 526 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 AIFM3Q96NN9 605 aa14.92□□□□□ -0.02
COTL1-202ENST00000561707 WDR18Q9BV38 432 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms