RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 CATIPQ7Z7H3 387 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 CCDC84Q86UT8 332 aaPredicted RBP14.81□□□□□ -0.04
CMTM4-203ENST00000561680 MICU3Q86XE3 530 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 LRRC47Q8N1G4 583 aaKnown RBP14.81□□□□□ -0.04
CMTM4-203ENST00000561680 TMX3Q96JJ7 454 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 HPS5Q9UPZ3 1129 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 MYH15Q9Y2K3 1946 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 A0A1W2PRG0 241 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 PFKFB2O60825 505 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 CALM1P0DP23 149 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 CALM2P0DP24 149 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 CALM3P0DP25 149 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 ECE1P42892 770 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 ST3GAL1Q11201 340 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 SYNE3Q6ZMZ3 975 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 C2orf69Q8N8R5 385 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 GMCL1P1Q8NEA9 526 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 ACER1Q8TDN7 264 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 GTF3C6Q969F1 213 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 CLMNQ96JQ2 1002 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 MAP3K14Q99558 947 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 MYL10Q9BUA6 226 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 SH2D4AQ9H788 454 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 AS3MTQ9HBK9 375 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 NAP1L2Q9ULW6 460 aaPredicted RBP14.8□□□□□ -0.04
CMTM4-203ENST00000561680 TMX2Q9Y320 296 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 A0A0G2JMZ2 1700 aa14.8□□□□□ -0.04
CMTM4-203ENST00000561680 RBBP6Q7Z6E9 1792 aaKnown RBP14.8□□□□□ -0.04
CMTM4-203ENST00000561680 GOLGA8AA7E2F4 631 aa14.79□□□□□ -0.04
CMTM4-203ENST00000561680 UBE2Q2LH0YL09 131 aa14.79□□□□□ -0.04
CMTM4-203ENST00000561680 METAP2P50579 478 aaKnown RBP eCLIP14.79□□□□□ -0.04
CMTM4-203ENST00000561680 FSTL1Q12841 308 aa14.79□□□□□ -0.04
CMTM4-203ENST00000561680 STK3Q13188 491 aa14.79□□□□□ -0.04
CMTM4-203ENST00000561680 RAB11FIP4Q86YS3 637 aa14.79□□□□□ -0.04
CMTM4-203ENST00000561680 SLKQ9H2G2 1235 aaPredicted RBP14.79□□□□□ -0.04
CMTM4-203ENST00000561680 ELP3Q9H9T3 547 aa14.79□□□□□ -0.04
CMTM4-203ENST00000561680 SPDYE5A6NIY4 337 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 SNHG28P0DPA3 235 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 PDHBP11177 359 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 RXRAP19793 462 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 SCRN1Q12765 414 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 CUL4AQ13619 759 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 GRM4Q14833 912 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 RTN1Q16799 776 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 ERO1BQ86YB8 467 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 NECAB1Q8N987 351 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 ZNF280CQ8ND82 737 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 NUP133Q8WUM0 1156 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 KIAA1683Q9H0B3 1180 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 VCPKMTQ9H867 229 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 GOPCQ9HD26 462 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 AFG3L2Q9Y4W6 797 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 ZHX2Q9Y6X8 837 aa14.78□□□□□ -0.04
CMTM4-203ENST00000561680 USP17L10C9JJH3 530 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 NDUFB10O96000 172 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 CCT2P78371 535 aaKnown RBP14.77□□□□□ -0.05
CMTM4-203ENST00000561680 PPATQ06203 517 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 MTMR2Q13614 643 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 PPP2R5BQ15173 497 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 CCDC83Q8IWF9 413 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 CCDC144CPQ8IYA2 1237 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 FANCBQ8NB91 859 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 CTCFLQ8NI51 663 aaPredicted RBP14.77□□□□□ -0.05
CMTM4-203ENST00000561680 DCAF4Q8WV16 495 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 CNKSR2Q8WXI2 1034 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 GMCL1Q96IK5 515 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 FEZ1Q99689 392 aa14.77□□□□□ -0.05
CMTM4-203ENST00000561680 NCOA5Q9HCD5 579 aaKnown RBP14.77□□□□□ -0.05
CMTM4-203ENST00000561680 FAM217BQ9NTX9 383 aaPredicted RBP14.77□□□□□ -0.05
CMTM4-203ENST00000561680 F5H6K3 240 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 CDC27P30260 824 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 KIF5BP33176 963 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 USP14P54578 494 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 BACE1P56817 501 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 KLRC3Q07444 240 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 SPP2Q13103 211 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 PPIL2Q13356 520 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 ASPRV1Q53RT3 343 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 KIAA1755Q5JYT7 1200 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 SLFN13Q68D06 897 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 OPTNQ96CV9 577 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 OTUD5Q96G74 571 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 RBM28Q9NW13 759 aaKnown RBP14.76□□□□□ -0.05
CMTM4-203ENST00000561680 MAD2L2Q9UI95 211 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 MTMR7Q9Y216 660 aa14.76□□□□□ -0.05
CMTM4-203ENST00000561680 CCDC196A0A1B0GTZ2 297 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
CMTM4-203ENST00000561680 TRIM75PA6NK02 468 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 C19orf81C9J6K1 198 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 PARP1P09874 1014 aaKnown RBP14.75□□□□□ -0.05
CMTM4-203ENST00000561680 HUNKP57058 714 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 ZNF543Q08ER8 600 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 ZYXQ15942 572 aaKnown RBP14.75□□□□□ -0.05
CMTM4-203ENST00000561680 TMTC3Q6ZXV5 915 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 STAG2Q8N3U4 1231 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 LPAR1Q92633 364 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 CHMP4CQ96CF2 233 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 SLC10A4Q96EP9 437 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms