RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 AMOTL1Q8IY63 956 aa19.52■□□□□ 0.72
SNX1-213ENST00000561026 CCDC17Q96LX7 622 aa19.52■□□□□ 0.72
SNX1-213ENST00000561026 SLC4A4Q9Y6R1 1079 aa19.52■□□□□ 0.72
SNX1-213ENST00000561026 SLC15A5A6NIM6 579 aa19.51■□□□□ 0.71
SNX1-213ENST00000561026 WDR78Q5VTH9 848 aa19.51■□□□□ 0.71
SNX1-213ENST00000561026 OGDHLQ9ULD0 1010 aa19.51■□□□□ 0.71
SNX1-213ENST00000561026 PTPREP23469 700 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 MNX1P50219 401 aaPredicted RBP19.5■□□□□ 0.71
SNX1-213ENST00000561026 KIAA1755Q5JYT7 1200 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 CTR9Q6PD62 1173 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 C16orf86Q6ZW13 317 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 LPAR1Q92633 364 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 TANGO6Q9C0B7 1094 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 NBPF3Q9H094 633 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 ARHGEF10LQ9HCE6 1279 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 RBM27Q9P2N5 1060 aaKnown RBP19.5■□□□□ 0.71
SNX1-213ENST00000561026 TMX2Q9Y320 296 aa19.5■□□□□ 0.71
SNX1-213ENST00000561026 ICA1Q05084 483 aa19.49■□□□□ 0.71
SNX1-213ENST00000561026 CLEC10AQ8IUN9 316 aa19.49■□□□□ 0.71
SNX1-213ENST00000561026 KBTBD3Q8NAB2 608 aa19.49■□□□□ 0.71
SNX1-213ENST00000561026 GPATCH3Q96I76 525 aa19.49■□□□□ 0.71
SNX1-213ENST00000561026 STRBPQ96SI9 672 aaKnown RBP19.49■□□□□ 0.71
SNX1-213ENST00000561026 IVNS1ABPQ9Y6Y0 642 aa19.49■□□□□ 0.71
SNX1-213ENST00000561026 GRB14Q14449 540 aa19.48■□□□□ 0.71
SNX1-213ENST00000561026 PRO3102Q9H379 93 aa19.48■□□□□ 0.71
SNX1-213ENST00000561026 SH2D4AQ9H788 454 aa19.48■□□□□ 0.71
SNX1-213ENST00000561026 BAZ2AQ9UIF9 1905 aaKnown RBP19.48■□□□□ 0.71
SNX1-213ENST00000561026 HOXC6P09630 235 aa19.47■□□□□ 0.71
SNX1-213ENST00000561026 CCND3P30281 292 aaPredicted RBP19.47■□□□□ 0.71
SNX1-213ENST00000561026 TSHZ3Q63HK5 1081 aa19.47■□□□□ 0.71
SNX1-213ENST00000561026 LHX8Q68G74 356 aa19.47■□□□□ 0.71
SNX1-213ENST00000561026 SPICE1Q8N0Z3 855 aa19.47■□□□□ 0.71
SNX1-213ENST00000561026 MOV10L1Q9BXT6 1211 aaKnown RBP19.47■□□□□ 0.71
SNX1-213ENST00000561026 VCPKMTQ9H867 229 aa19.47■□□□□ 0.71
SNX1-213ENST00000561026 FLRT1Q9NZU1 646 aa19.47■□□□□ 0.71
SNX1-213ENST00000561026 SZT2Q5T011 3432 aa19.47■□□□□ 0.71
SNX1-213ENST00000561026 DSG3P32926 999 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 MFSD14CQ5VZR4 134 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 MB21D1Q8N884 522 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 OSBP2Q969R2 916 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 SPATC1LQ9H0A9 340 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 C11orf49Q9H6J7 331 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 KANSL2Q9H9L4 492 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 ARPP21Q9UBL0 812 aaPredicted RBP19.46■□□□□ 0.71
SNX1-213ENST00000561026 PCDHB15Q9Y5E8 787 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 MYH7P12883 1935 aa19.46■□□□□ 0.71
SNX1-213ENST00000561026 GSG1L2A8MUP6 293 aa19.45■□□□□ 0.7
SNX1-213ENST00000561026 RNF113AO15541 343 aaKnown RBP19.45■□□□□ 0.7
SNX1-213ENST00000561026 STRNO43815 780 aa19.45■□□□□ 0.7
SNX1-213ENST00000561026 FLOT1O75955 427 aa19.45■□□□□ 0.7
SNX1-213ENST00000561026 EEF2P13639 858 aaKnown RBP19.45■□□□□ 0.7
SNX1-213ENST00000561026 ATP2B2Q01814 1243 aa19.45■□□□□ 0.7
SNX1-213ENST00000561026 SBK1Q52WX2 424 aa19.45■□□□□ 0.7
SNX1-213ENST00000561026 GIMAP6Q6P9H5 292 aa19.45■□□□□ 0.7
SNX1-213ENST00000561026 SHCBP1Q8NEM2 672 aa19.45■□□□□ 0.7
SNX1-213ENST00000561026 APPBP2Q92624 585 aa19.45■□□□□ 0.7
SNX1-213ENST00000561026 WDR46O15213 610 aaKnown RBP19.44■□□□□ 0.7
SNX1-213ENST00000561026 ZFYP08048 801 aaPredicted RBP19.44■□□□□ 0.7
SNX1-213ENST00000561026 ERCC3P19447 782 aa19.44■□□□□ 0.7
SNX1-213ENST00000561026 NPLOC4Q8TAT6 608 aa19.44■□□□□ 0.7
SNX1-213ENST00000561026 IGHA2P01877 340 aa19.44■□□□□ 0.7
SNX1-213ENST00000561026 ATG4CQ96DT6 458 aa19.44■□□□□ 0.7
SNX1-213ENST00000561026 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNX1-213ENST00000561026 RLFQ13129 1914 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 LAMA3Q16787 3333 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 COL6A1P12109 1028 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 ADORA2AP29274 412 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 DPP9Q86TI2 863 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 C7orf61Q8IZ16 206 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 MROH8Q9H579 483 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 STAP2Q9UGK3 403 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 ADAMTS5Q9UNA0 930 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 MYH8P13535 1937 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 PFASO15067 1338 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 TTC41PQ6P2S7 1318 aa19.43■□□□□ 0.7
SNX1-213ENST00000561026 GPAA1O43292 621 aa19.42■□□□□ 0.7
SNX1-213ENST00000561026 RASA1P20936 1047 aa19.42■□□□□ 0.7
SNX1-213ENST00000561026 CYP2C19P33261 490 aa19.42■□□□□ 0.7
SNX1-213ENST00000561026 PLS1Q14651 629 aa19.42■□□□□ 0.7
SNX1-213ENST00000561026 GOPCQ9HD26 462 aa19.42■□□□□ 0.7
SNX1-213ENST00000561026 MINDY4BA8MYZ0 360 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 ERC2O15083 957 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 GNAT2P19087 354 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 TMEM132BQ14DG7 1078 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 LRRFIP1Q32MZ4 808 aaKnown RBP19.41■□□□□ 0.7
SNX1-213ENST00000561026 OLFML2BQ68BL8 750 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 SAMD1Q6SPF0 538 aaPredicted RBP19.41■□□□□ 0.7
SNX1-213ENST00000561026 NCAPG2Q86XI2 1143 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 ABRAQ8N0Z2 381 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 MKNK2Q9HBH9 465 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 DDX20Q9UHI6 824 aaKnown RBP19.41■□□□□ 0.7
SNX1-213ENST00000561026 ALPK3Q96L96 1907 aa19.41■□□□□ 0.7
SNX1-213ENST00000561026 A0A1W2PPC1 479 aa19.4■□□□□ 0.7
SNX1-213ENST00000561026 MSCO60682 206 aa19.4■□□□□ 0.7
SNX1-213ENST00000561026 COBLO75128 1261 aa19.4■□□□□ 0.7
SNX1-213ENST00000561026 CNGA1P29973 690 aa19.4■□□□□ 0.7
SNX1-213ENST00000561026 STK11IPQ8N1F8 1099 aa19.4■□□□□ 0.7
SNX1-213ENST00000561026 PI4K2BQ8TCG2 481 aa19.4■□□□□ 0.7
SNX1-213ENST00000561026 OTUD7AQ8TE49 926 aaPredicted RBP19.4■□□□□ 0.7
SNX1-213ENST00000561026 EPB41L4AQ9HCS5 686 aaPredicted RBP19.4■□□□□ 0.7
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