RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 SGMS1Q86VZ5 419 aa14.26□□□□□ -0.13
IRF9-211ENST00000560852 ENAHQ8N8S7 591 aaPredicted RBP14.26□□□□□ -0.13
IRF9-211ENST00000560852 GMCL1Q96IK5 515 aa14.26□□□□□ -0.13
IRF9-211ENST00000560852 MAP3K14Q99558 947 aa14.26□□□□□ -0.13
IRF9-211ENST00000560852 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.26□□□□□ -0.13
IRF9-211ENST00000560852 CLIP2Q9UDT6 1046 aa14.26□□□□□ -0.13
IRF9-211ENST00000560852 PHIPQ8WWQ0 1821 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 F5H6K3 240 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 RCAN1P53805 252 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 KLRC3Q07444 240 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 RRP12Q5JTH9 1297 aaKnown RBP14.25□□□□□ -0.13
IRF9-211ENST00000560852 LBX2Q6XYB7 198 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 CCDC84Q86UT8 332 aaPredicted RBP14.25□□□□□ -0.13
IRF9-211ENST00000560852 IFNL1Q8IU54 200 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 STK11IPQ8N1F8 1099 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 ZIC5Q96T25 663 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 TMEM47Q9BQJ4 181 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 AGTPBP1Q9UPW5 1226 aa14.25□□□□□ -0.13
IRF9-211ENST00000560852 MYPNQ86TC9 1320 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 CCL15-CCL14A0A0B4J2E2 113 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 TRIM75PA6NK02 468 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 WDR46O15213 610 aaKnown RBP14.24□□□□□ -0.13
IRF9-211ENST00000560852 NMT2O60551 498 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 MAP2K1Q02750 393 aaPredicted RBP14.24□□□□□ -0.13
IRF9-211ENST00000560852 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.13
IRF9-211ENST00000560852 MTMR2Q13614 643 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 SART3Q15020 963 aaKnown RBP14.24□□□□□ -0.13
IRF9-211ENST00000560852 CCL15Q16663 113 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 OTUD7BQ6GQQ9 843 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 RUFY3Q7L099 469 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 UBAC1Q9BSL1 405 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 GOPCQ9HD26 462 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 TOMM22Q9NS69 142 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 SAGE1Q9NXZ1 904 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 TMOD4Q9NZQ9 345 aa14.24□□□□□ -0.13
IRF9-211ENST00000560852 TNKSO95271 1327 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 IGF2BP3O00425 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
IRF9-211ENST00000560852 SH2B2O14492 632 aaPredicted RBP14.23□□□□□ -0.13
IRF9-211ENST00000560852 CA12O43570 354 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 PRC1O43663 620 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 AOC2O75106 756 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 RPS6KB1P23443 525 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 HMGCS2P54868 508 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 COL9A3Q14050 684 aaPredicted RBP14.23□□□□□ -0.13
IRF9-211ENST00000560852 KIAA1755Q5JYT7 1200 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 CATSPERGQ6ZRH7 1159 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 KIF2CQ99661 725 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 C22orf23Q9BZE7 217 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 LY9Q9HBG7 655 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 WBP1LQ9NX94 342 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 ADAMTS5Q9UNA0 930 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 STX8Q9UNK0 236 aa14.23□□□□□ -0.13
IRF9-211ENST00000560852 ERICH2A1L162 156 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L15C9J2P7 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L13C9JLJ4 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L11C9JVI0 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L18D6R9N7 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L22D6RA61 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L17D6RBQ6 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L19D6RCP7 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L20D6RJB6 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 IFIT3O14879 490 aaKnown RBP14.22□□□□□ -0.13
IRF9-211ENST00000560852 NDUFB10O96000 172 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 VCAM1P19320 739 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 USP17L24Q0WX57 530 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 TROAPQ12815 778 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 BTNL9Q6UXG8 535 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 CLEC10AQ8IUN9 316 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 DCAF4Q8WV16 495 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 TBC1D32Q96NH3 1257 aa14.22□□□□□ -0.13
IRF9-211ENST00000560852 UPF2Q9HAU5 1272 aaKnown RBP14.22□□□□□ -0.13
IRF9-211ENST00000560852 FDX1P10109 184 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 SMARCA1P28370 1054 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 WTAPQ15007 396 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 PPP2R5BQ15173 497 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 IFIT1BQ5T764 474 aaKnown RBP14.21□□□□□ -0.13
IRF9-211ENST00000560852 FAM43AQ8N2R8 423 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 PNMA1Q8ND90 353 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 GTF3C2Q8WUA4 911 aaPredicted RBP14.21□□□□□ -0.13
IRF9-211ENST00000560852 JAKMIP1Q96N16 626 aaKnown RBP14.21□□□□□ -0.13
IRF9-211ENST00000560852 FEZ1Q99689 392 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 HOXC10Q9NYD6 342 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 CYP46A1Q9Y6A2 500 aa14.21□□□□□ -0.13
IRF9-211ENST00000560852 ATAD5Q96QE3 1844 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 PDHXO00330 501 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 PDHBP11177 359 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 COG2Q14746 738 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 TMEM67Q5HYA8 995 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 TREML2Q5T2D2 321 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 GPATCH4Q5T3I0 446 aaKnown RBP14.2□□□□□ -0.14
IRF9-211ENST00000560852 SLFN13Q68D06 897 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 PAXIP1Q6ZW49 1069 aaPredicted RBP14.2□□□□□ -0.14
IRF9-211ENST00000560852 ZKSCAN3Q9BRR0 538 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 KAT14Q9H8E8 782 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 PNMA3Q9UL41 463 aa14.2□□□□□ -0.14
IRF9-211ENST00000560852 LOC285556D6RIA3 1793 aa14.19□□□□□ -0.14
IRF9-211ENST00000560852 PALM3A6NDB9 673 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms