RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.47□□□□□ -0.25
GABPB1-210ENST00000560825 TACC3Q9Y6A5 838 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 ZNF236Q9UL36 1845 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L15C9J2P7 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L11C9JVI0 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L18D6R9N7 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L22D6RA61 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L19D6RCP7 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L20D6RJB6 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.26
GABPB1-210ENST00000560825 SGPL1O95470 568 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 USP17L24Q0WX57 530 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 CCDC129Q6ZRS4 1044 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 CABP5Q9NP86 173 aa13.46□□□□□ -0.26
GABPB1-210ENST00000560825 GPAA1O43292 621 aa13.45□□□□□ -0.26
GABPB1-210ENST00000560825 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
GABPB1-210ENST00000560825 UBXN2AP68543 259 aa13.45□□□□□ -0.26
GABPB1-210ENST00000560825 CRISPLD2Q9H0B8 497 aa13.45□□□□□ -0.26
GABPB1-210ENST00000560825 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.261e-6■■■□□ 14.7
GABPB1-210ENST00000560825 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
GABPB1-210ENST00000560825 FBXO28Q9NVF7 368 aa13.45□□□□□ -0.26
GABPB1-210ENST00000560825 PRDM1O75626 825 aa13.44□□□□□ -0.26
GABPB1-210ENST00000560825 CCND3P30281 292 aaPredicted RBP13.44□□□□□ -0.26
GABPB1-210ENST00000560825 CACNB2Q08289 660 aaPredicted RBP13.44□□□□□ -0.26
GABPB1-210ENST00000560825 MAP3K21Q5TCX8 1036 aa13.44□□□□□ -0.26
GABPB1-210ENST00000560825 TMEM179Q6ZVK1 233 aa13.44□□□□□ -0.26
GABPB1-210ENST00000560825 NPLOC4Q8TAT6 608 aa13.44□□□□□ -0.26
GABPB1-210ENST00000560825 APPBP2Q92624 585 aa13.44□□□□□ -0.26
GABPB1-210ENST00000560825 MINDY4BA8MYZ0 360 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 HMGCRP04035 888 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 MX1P20591 662 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 RASA1P20936 1047 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 USP14P54578 494 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 ICA1Q05084 483 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 LBX2Q6XYB7 198 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 PLEKHH3Q7Z736 793 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 ATG4CQ96DT6 458 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 NUP88Q99567 741 aaPredicted RBP13.43□□□□□ -0.26
GABPB1-210ENST00000560825 TANGO6Q9C0B7 1094 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 SWAP70Q9UH65 585 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 COLQQ9Y215 455 aaPredicted RBP13.43□□□□□ -0.26
GABPB1-210ENST00000560825 TMX2Q9Y320 296 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 RABGAP1Q9Y3P9 1069 aa13.43□□□□□ -0.26
GABPB1-210ENST00000560825 ROBO3Q96MS0 1386 aa13.42□□□□□ -0.26
GABPB1-210ENST00000560825 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
GABPB1-210ENST00000560825 IGHDP01880 384 aa13.42□□□□□ -0.26
GABPB1-210ENST00000560825 TFRCP02786 760 aaKnown RBP13.42□□□□□ -0.26
GABPB1-210ENST00000560825 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
GABPB1-210ENST00000560825 ATP2B2Q01814 1243 aa13.42□□□□□ -0.26
GABPB1-210ENST00000560825 TRPV1Q8NER1 839 aa13.42□□□□□ -0.26
GABPB1-210ENST00000560825 EXOC6Q8TAG9 804 aa13.42□□□□□ -0.26
GABPB1-210ENST00000560825 NKX2-3Q8TAU0 364 aa13.42□□□□□ -0.26
GABPB1-210ENST00000560825 PAWRQ96IZ0 340 aaKnown RBP13.42□□□□□ -0.26
GABPB1-210ENST00000560825 MOV10L1Q9BXT6 1211 aaKnown RBP13.42□□□□□ -0.26
GABPB1-210ENST00000560825 SMCHD1A6NHR9 2005 aa13.42□□□□□ -0.26
GABPB1-210ENST00000560825 TTC41PQ6P2S7 1318 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 IGHA2P01877 340 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 MAPK4P31152 587 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 SBK1Q52WX2 424 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 HABP4Q5JVS0 413 aaKnown RBP13.41□□□□□ -0.26
GABPB1-210ENST00000560825 ZMYM1Q5SVZ6 1142 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 WDR78Q5VTH9 848 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 RASGRP2Q7LDG7 609 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 NUDT12Q9BQG2 462 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 VCPKMTQ9H867 229 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 RPTORQ8N122 1335 aa13.41□□□□□ -0.26
GABPB1-210ENST00000560825 IGKV6D-41A0A0C4DH26 115 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 PTPREP23469 700 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 MAP2K5Q13163 448 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 COG2Q14746 738 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 TMEM132BQ14DG7 1078 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 LHX8Q68G74 356 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 IFNL3Q8IZI9 196 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 DPF3Q92784 378 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 CHMP4CQ96CF2 233 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 FSD1Q9BTV5 496 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 ARPP21Q9UBL0 812 aaPredicted RBP13.4□□□□□ -0.26
GABPB1-210ENST00000560825 MCM3APO60318 1980 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 LCTP09848 1927 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 PFASO15067 1338 aa13.4□□□□□ -0.26
GABPB1-210ENST00000560825 COBLO75128 1261 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 FLOT1O75955 427 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 XRCC5P13010 732 aaKnown RBP13.39□□□□□ -0.27
GABPB1-210ENST00000560825 ERCC3P19447 782 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 CYP2C19P33261 490 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 PDE1AP54750 535 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-210ENST00000560825 GRB14Q14449 540 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 APBA2Q99767 749 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 SPATC1LQ9H0A9 340 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 HMX1Q9NP08 348 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms