RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 DEXIO95424 95 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 ASNSP08243 561 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 FDPSP14324 419 aaKnown RBP10□□□□□ -0.81
TRAF3-209ENST00000560463 HIRAP54198 1017 aaPredicted RBP10□□□□□ -0.81
TRAF3-209ENST00000560463 AKAP17AQ02040 695 aaKnown RBP10□□□□□ -0.81
TRAF3-209ENST00000560463 SUPT20HL1Q3ZLR7 823 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 IFFO2Q5TF58 517 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 TMTC3Q6ZXV5 915 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 NBPF11Q86T75 865 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 RAB11FIP4Q86YS3 637 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 DCPSQ96C86 337 aaKnown RBP10□□□□□ -0.81
TRAF3-209ENST00000560463 DDX11Q96FC9 970 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 CLIP2Q9UDT6 1046 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 MAD2L2Q9UI95 211 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 MTMR6Q9Y217 621 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 VPS37CA5D8V6 355 aaPredicted RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 PALM3A6NDB9 673 aaPredicted RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 CTNND1O60716 968 aaKnown RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 GDF11O95390 407 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 F13A1P00488 732 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 GH2P01242 217 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 PARP1P09874 1014 aaKnown RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 SNHG28P0DPA3 235 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 EEF2P13639 858 aaKnown RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 XBP1P17861 261 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 PTMSP20962 102 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 CAP2P40123 477 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 ICA1Q05084 483 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 PKP1Q13835 747 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 SEPT2Q15019 361 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 ASPRV1Q53RT3 343 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 PNMA8AQ86V59 439 aaPredicted RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 PHKBQ93100 1093 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 C8orf76Q96K31 380 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 SLC26A6Q9BXS9 759 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 ZNF341Q9BYN7 854 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 ZSCAN16Q9H4T2 348 aaPredicted RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 ARHGEF10LQ9HCE6 1279 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 GGA3Q9NZ52 723 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 ASTN2O75129 1339 aaPredicted RBP9.99□□□□□ -0.81
TRAF3-209ENST00000560463 RLFQ13129 1914 aa9.99□□□□□ -0.81
TRAF3-209ENST00000560463 LOC285556D6RIA3 1793 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 PHF20L1A8MW92 1017 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 GOLGA6L22H0YM25 854 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 PDHBP11177 359 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 EPHX2P34913 555 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 FUT2Q10981 343 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 TRIM29Q14134 588 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 NBPF12Q5TAG4 269 aaPredicted RBP9.98□□□□□ -0.81
TRAF3-209ENST00000560463 MIGA2Q7L4E1 593 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 FAM177A1Q8N128 213 aaPredicted RBP9.98□□□□□ -0.81
TRAF3-209ENST00000560463 GMCL1P1Q8NEA9 526 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 FBXO18Q8NFZ0 1043 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 DCAF4Q8WV16 495 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 ALG1Q9BT22 464 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 SPZ1Q9BXG8 430 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 SH2D4AQ9H788 454 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 ZBTB21Q9ULJ3 1066 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 CNTNAP5Q8WYK1 1306 aa9.98□□□□□ -0.81
TRAF3-209ENST00000560463 KLRF2D3W0D1 207 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 PLEKHA8P1O95397 391 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 BAG4O95429 457 aaKnown RBP9.97□□□□□ -0.81
TRAF3-209ENST00000560463 SLURP2P0DP57 97 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 GUCY1A2P33402 732 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 ATP2B2Q01814 1243 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 USP48Q86UV5 1035 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 SULF1Q8IWU6 871 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 CDAN1Q8IWY9 1227 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 SRBD1Q8N5C6 995 aaKnown RBP9.97□□□□□ -0.81
TRAF3-209ENST00000560463 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 ZNF112Q9UJU3 913 aa9.97□□□□□ -0.81
TRAF3-209ENST00000560463 ZNFX1Q9P2E3 1918 aaKnown RBP9.97□□□□□ -0.81
TRAF3-209ENST00000560463 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 hCG_1984214I3L0E3 225 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 MCM4P33991 863 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 ZNF543Q08ER8 600 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 RRP1BQ14684 758 aaKnown RBP9.96□□□□□ -0.82
TRAF3-209ENST00000560463 PFKFB3Q16875 520 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-209ENST00000560463 ATL3Q6DD88 541 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 CDC37L1Q7L3B6 337 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 BRAPQ7Z569 592 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 SIAH1Q8IUQ4 282 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 CMTR1Q8N1G2 835 aaKnown RBP9.96□□□□□ -0.82
TRAF3-209ENST00000560463 LRRC47Q8N1G4 583 aaKnown RBP9.96□□□□□ -0.82
TRAF3-209ENST00000560463 STAG2Q8N3U4 1231 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 CCDC82Q8N4S0 544 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 ZNF713Q8N859 430 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-209ENST00000560463 GMCL1Q96IK5 515 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-209ENST00000560463 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 SH3GLB2Q9NR46 395 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 TMX2Q9Y320 296 aa9.96□□□□□ -0.82
TRAF3-209ENST00000560463 V9GY48 417 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-209ENST00000560463 F5H6K3 240 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 DTNBO60941 627 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 PPFIA3O75145 1194 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 SCG2P13521 617 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms