RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 JAG1P78504 1218 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 TROAPQ12815 778 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 SHROOM1Q2M3G4 852 aaPredicted RBP8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 NBPF12Q5TAG4 269 aaPredicted RBP8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 USP50Q70EL3 339 aaPredicted RBP8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 MIGA2Q7L4E1 593 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 CATIPQ7Z7H3 387 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 MICU3Q86XE3 530 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 FANCBQ8NB91 859 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 SMARCC2Q8TAQ2 1214 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 TMEM47Q9BQJ4 181 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 KAT14Q9H8E8 782 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 CHMP5Q9NZZ3 219 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 PCDH10Q9P2E7 1040 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 MPHOSPH10O00566 681 aaKnown RBP8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 GDF11O95390 407 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 CALM1P0DP23 149 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 CALM2P0DP24 149 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 CALM3P0DP25 149 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 PPP2R5BQ15173 497 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 NTRK3Q16288 839 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 RTN1Q16799 776 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 ABCB5Q2M3G0 1257 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 TMEM179Q6ZVK1 233 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 SIAH1Q8IUQ4 282 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 CCDC144CPQ8IYA2 1237 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 PNMA1Q8ND90 353 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 ZC3H15Q8WU90 426 aaKnown RBP8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 NUP133Q8WUM0 1156 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 MAP3K14Q99558 947 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 TAF1DQ9H5J8 278 aaPredicted RBP8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 KANSL2Q9H9L4 492 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 STX8Q9UNK0 236 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 PPP2R3BQ9Y5P8 575 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 WDR90Q96KV7 1748 aa8.45□□□□□ -1.06
HMBOX1-214ENST00000560357 CCDC196A0A1B0GTZ2 297 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 PTPDC1A2A3K4 754 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 IQCA1LA6NCM1 817 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 CPLX1O14810 134 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 TTLL1O95922 423 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 GH2P01242 217 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 FDPSP14324 419 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 IFNAR1P17181 557 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 CAP2P40123 477 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 NUCB2P80303 420 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 HMGN5P82970 282 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 SEPT2Q15019 361 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 PPP4R3BQ5MIZ7 849 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 PRAMEF18Q5VWM3 479 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 CPLX2Q6PUV4 134 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 CLEC10AQ8IUN9 316 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 MKL1Q969V6 931 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 DCPSQ96C86 337 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 HOOK2Q96ED9 719 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 CABP5Q9NP86 173 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 NYAP2Q9P242 653 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 CLIP2Q9UDT6 1046 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 ZDHHC9Q9Y397 364 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 MYH4Q9Y623 1939 aa8.44□□□□□ -1.06
HMBOX1-214ENST00000560357 SRCAPQ6ZRS2 3230 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 PPFIA3O75145 1194 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 EEF2P13639 858 aaKnown RBP8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 SYT1P21579 422 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 KIF5BP33176 963 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 FUT2Q10981 343 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 PKP1Q13835 747 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 GRM4Q14833 912 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 RAB3GAP1Q15042 981 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 SUPT20HL1Q3ZLR7 823 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 LARP1BQ659C4 914 aaKnown RBP8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 DCAF15Q66K64 600 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 NBPF11Q86T75 865 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 SULF1Q8IWU6 871 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 CMTR1Q8N1G2 835 aaKnown RBP8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 SLAIN1Q8ND83 568 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 CTCFLQ8NI51 663 aaPredicted RBP8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 DDX11Q96FC9 970 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 RBM28Q9NW13 759 aaKnown RBP8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 ORC3Q9UBD5 711 aaPredicted RBP8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 MAD2L2Q9UI95 211 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 ZNF112Q9UJU3 913 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 ZBTB21Q9ULJ3 1066 aa8.43□□□□□ -1.06
HMBOX1-214ENST00000560357 PALM3A6NDB9 673 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 ADM5C9JUS6 153 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 STX6O43752 255 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 CTNND1O60716 968 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 CDKL5O76039 1030 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 PLEKHA8P1O95397 391 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 FMNL1O95466 1100 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 BRD1O95696 1058 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 SNHG28P0DPA3 235 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 PDIA4P13667 645 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 PDCP20941 246 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 ATP2B2Q01814 1243 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 ICA1Q05084 483 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 SSRP1Q08945 709 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 EAPPQ56P03 285 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms