RNA–Protein interactions for RNA: ENST00000560318.1

NUSAP1-211, Transcript of nucleolar and spindle associated protein 1, humanhuman

TSL 5

Gene NUSAP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-211ENST00000560318 PNMA3Q9UL41 463 aa15.81■□□□□ 0.12
NUSAP1-211ENST00000560318 ADGRA2Q96PE1 1338 aa15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 ECM2O94769 699 aaPredicted RBP15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 SLC3A2P08195 630 aaKnown RBP15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 HSPD1P10809 573 aaKnown RBP15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 RASA1P20936 1047 aa15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 USP14P54578 494 aa15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 MFAP1P55081 439 aaKnown RBP15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 PDE4BQ07343 736 aa15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 ALX1Q15699 326 aa15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 CLEC10AQ8IUN9 316 aa15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 SMCR8Q8TEV9 937 aaPredicted RBP15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 ZNF287Q9HBT7 754 aa15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 TRIM17Q9Y577 477 aa15.8■□□□□ 0.12
NUSAP1-211ENST00000560318 ROBO3Q96MS0 1386 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 A0A1W2PRG0 241 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 PRDM1O75626 825 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 FGAP02671 866 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 HOXA7P31268 230 aaPredicted RBP15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 CAP1Q01518 475 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 ICA1Q05084 483 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 CTDSPL2Q05D32 466 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 KIF22Q14807 665 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 PKN2Q16513 984 aaKnown RBP15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 SKAP1Q86WV1 359 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 SIAH1Q8IUQ4 282 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 KANSL2Q9H9L4 492 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 ARHGEF10LQ9HCE6 1279 aa15.79■□□□□ 0.12
NUSAP1-211ENST00000560318 MYH8P13535 1937 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 BCRP11274 1271 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 IRX3P78415 501 aaPredicted RBP15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 LACTBP83111 547 aaPredicted RBP15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 ATP2B2Q01814 1243 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 ARHGEF6Q15052 776 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 OTOP1Q7RTM1 612 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 ABHD8Q96I13 439 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 C12orf42Q96LP6 360 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 P2RX7Q99572 595 aaKnown RBP15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 TMEM121BQ9BXQ6 578 aaPredicted RBP15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 EFCC1Q9HA90 598 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 INCENPQ9NQS7 918 aa15.78■□□□□ 0.12
NUSAP1-211ENST00000560318 LOC285556D6RIA3 1793 aa15.77■□□□□ 0.12
NUSAP1-211ENST00000560318 EEF2P13639 858 aaKnown RBP15.77■□□□□ 0.12
NUSAP1-211ENST00000560318 IFNLR1Q8IU57 520 aaPredicted RBP15.77■□□□□ 0.12
NUSAP1-211ENST00000560318 ANKRD13CQ8N6S4 541 aa15.77■□□□□ 0.12
NUSAP1-211ENST00000560318 SPOCK2Q92563 424 aa15.77■□□□□ 0.12
NUSAP1-211ENST00000560318 ARHGAP39Q9C0H5 1083 aa15.77■□□□□ 0.12
NUSAP1-211ENST00000560318 TMX2Q9Y320 296 aa15.77■□□□□ 0.12
NUSAP1-211ENST00000560318 USP17L15C9J2P7 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 USP17L13C9JLJ4 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 USP17L11C9JVI0 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 USP17L18D6R9N7 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 USP17L22D6RA61 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 USP17L17D6RBQ6 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 USP17L19D6RCP7 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 USP17L20D6RJB6 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 VCAM1P19320 739 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 CHMLP26374 656 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 PSMC4P43686 418 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 GCLCP48506 637 aaPredicted RBP15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 TFAP4Q01664 338 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 USP17L24Q0WX57 530 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 FBXO46Q6PJ61 603 aaPredicted RBP15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 SH2D4AQ9H788 454 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 ANAPC4Q9UJX5 808 aa15.76■□□□□ 0.11
NUSAP1-211ENST00000560318 FMNL1O95466 1100 aaPredicted RBP15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 TSPY3P0CV98 308 aa15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 TSPY8P0CW00 308 aa15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 HAND2P61296 217 aa15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 FAM47AQ5JRC9 791 aa15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 CATSPERGQ6ZRH7 1159 aa15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 RUFY2Q8WXA3 655 aa15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 PTPN22Q9Y2R2 807 aa15.75■□□□□ 0.11
NUSAP1-211ENST00000560318 CTGFP29279 349 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 HERVK_113P62684 666 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 PDAP1Q13442 181 aaKnown RBP15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 KIAA1755Q5JYT7 1200 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 SPICE1Q8N0Z3 855 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 NEDD1Q8NHV4 660 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 IL25Q9H293 177 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 TOMM22Q9NS69 142 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 NYAP2Q9P242 653 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 CLIP2Q9UDT6 1046 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 CIZ1Q9ULV3 898 aaPredicted RBP15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 TACC3Q9Y6A5 838 aa15.74■□□□□ 0.11
NUSAP1-211ENST00000560318 ZMYM6O95789 1325 aa15.73■□□□□ 0.11
NUSAP1-211ENST00000560318 IGKV6D-41A0A0C4DH26 115 aa15.73■□□□□ 0.11
NUSAP1-211ENST00000560318 TSPY2A6NKD2 308 aa15.73■□□□□ 0.11
NUSAP1-211ENST00000560318 CCDC85CA6NKD9 419 aa15.73■□□□□ 0.11
NUSAP1-211ENST00000560318 ZNF213O14771 459 aa15.73■□□□□ 0.11
NUSAP1-211ENST00000560318 RAD21O60216 631 aa15.73■□□□□ 0.11
NUSAP1-211ENST00000560318 RANBP6O60518 1105 aaKnown RBP15.73■□□□□ 0.11
NUSAP1-211ENST00000560318 HOXD10P28358 340 aa15.73■□□□□ 0.11
NUSAP1-211ENST00000560318 FAM110CQ1W6H9 321 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms