RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 CACNB2Q08289 660 aaPredicted RBP15.06■□□□□ 0
SNX1-209ENST00000559961 GIMAP6Q6P9H5 292 aa15.06■□□□□ 0
SNX1-209ENST00000559961 C16orf86Q6ZW13 317 aa15.06■□□□□ 0
SNX1-209ENST00000559961 KBTBD3Q8NAB2 608 aa15.06■□□□□ 0
SNX1-209ENST00000559961 NACAP1Q9BZK3 213 aa15.06■□□□□ 0
SNX1-209ENST00000559961 MROH8Q9H579 483 aa15.06■□□□□ 0
SNX1-209ENST00000559961 LOC285556D6RIA3 1793 aa15.06■□□□□ 0
SNX1-209ENST00000559961 MINDY4BA8MYZ0 360 aa15.05■□□□□ -0
SNX1-209ENST00000559961 WDR46O15213 610 aaKnown RBP15.05■□□□□ -0
SNX1-209ENST00000559961 MSCO60682 206 aa15.05■□□□□ -0
SNX1-209ENST00000559961 SLC3A2P08195 630 aaKnown RBP15.05■□□□□ -0
SNX1-209ENST00000559961 AKR1B1P15121 316 aa15.05■□□□□ -0
SNX1-209ENST00000559961 TDO2P48775 406 aa15.05■□□□□ -0
SNX1-209ENST00000559961 TRIM32Q13049 653 aa15.05■□□□□ -0
SNX1-209ENST00000559961 NCAPG2Q86XI2 1143 aa15.05■□□□□ -0
SNX1-209ENST00000559961 ZNF444Q8N0Y2 327 aaPredicted RBP15.05■□□□□ -0
SNX1-209ENST00000559961 SLC44A5Q8NCS7 719 aa15.05■□□□□ -0
SNX1-209ENST00000559961 USP6NLQ92738 828 aa15.05■□□□□ -0
SNX1-209ENST00000559961 PUS7LQ9H0K6 701 aaKnown RBP15.05■□□□□ -0
SNX1-209ENST00000559961 VCPKMTQ9H867 229 aa15.05■□□□□ -0
SNX1-209ENST00000559961 OGDHLQ9ULD0 1010 aa15.05■□□□□ -0
SNX1-209ENST00000559961 TMX2Q9Y320 296 aa15.05■□□□□ -0
SNX1-209ENST00000559961 ATAD5Q96QE3 1844 aa15.05■□□□□ -0
SNX1-209ENST00000559961 PTPRFP10586 1907 aa15.04■□□□□ -0
SNX1-209ENST00000559961 MGAMO43451 1857 aa15.04■□□□□ -0
SNX1-209ENST00000559961 A0A1W2PRG0 241 aa15.04■□□□□ -0
SNX1-209ENST00000559961 CNMDO75829 334 aa15.04■□□□□ -0
SNX1-209ENST00000559961 SLC25A27O95847 323 aa15.04■□□□□ -0
SNX1-209ENST00000559961 DSG3P32926 999 aa15.04■□□□□ -0
SNX1-209ENST00000559961 MAP3K21Q5TCX8 1036 aa15.04■□□□□ -0
SNX1-209ENST00000559961 CTR9Q6PD62 1173 aa15.04■□□□□ -0
SNX1-209ENST00000559961 SPICE1Q8N0Z3 855 aa15.04■□□□□ -0
SNX1-209ENST00000559961 SHCBP1Q8NEM2 672 aa15.04■□□□□ -0
SNX1-209ENST00000559961 APPBP2Q92624 585 aa15.04■□□□□ -0
SNX1-209ENST00000559961 SPATC1LQ9H0A9 340 aa15.04■□□□□ -0
SNX1-209ENST00000559961 BTBD7Q9P203 1132 aa15.04■□□□□ -0
SNX1-209ENST00000559961 CENPFP49454 3210 aa15.04■□□□□ -0
SNX1-209ENST00000559961 TTC41PQ6P2S7 1318 aa15.03■□□□□ -0
SNX1-209ENST00000559961 CYP2D7A0A087X1C5 515 aa15.03■□□□□ -0
SNX1-209ENST00000559961 EEF2P13639 858 aaKnown RBP15.03■□□□□ -0
SNX1-209ENST00000559961 GRB14Q14449 540 aa15.03■□□□□ -0
SNX1-209ENST00000559961 CCL14Q16627 93 aa15.03■□□□□ -0
SNX1-209ENST00000559961 SLFNL1Q499Z3 407 aa15.03■□□□□ -0
SNX1-209ENST00000559961 C7orf61Q8IZ16 206 aa15.03■□□□□ -0
SNX1-209ENST00000559961 STRBPQ96SI9 672 aaKnown RBP15.03■□□□□ -0
SNX1-209ENST00000559961 MOV10L1Q9BXT6 1211 aaKnown RBP15.03■□□□□ -0
SNX1-209ENST00000559961 MYH1P12882 1939 aa15.03■□□□□ -0
SNX1-209ENST00000559961 HOXC6P09630 235 aa15.02■□□□□ -0
SNX1-209ENST00000559961 FCER1AP12319 257 aa15.02■□□□□ -0
SNX1-209ENST00000559961 ERCC3P19447 782 aa15.02■□□□□ -0
SNX1-209ENST00000559961 COPB2P35606 906 aa15.02■□□□□ -0
SNX1-209ENST00000559961 SBK1Q52WX2 424 aa15.02■□□□□ -0
SNX1-209ENST00000559961 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
SNX1-209ENST00000559961 DIS3LQ8TF46 1054 aaKnown RBP15.02■□□□□ -0
SNX1-209ENST00000559961 FSD1Q9BTV5 496 aa15.02■□□□□ -0
SNX1-209ENST00000559961 RBM27Q9P2N5 1060 aaKnown RBP15.02■□□□□ -0
SNX1-209ENST00000559961 FOCADQ5VW36 1801 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 A0A1W2PPC1 479 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 ADORA2AP29274 412 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 CCND3P30281 292 aaPredicted RBP15.01□□□□□ -0.01
SNX1-209ENST00000559961 FXR1P51114 621 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNX1-209ENST00000559961 PDE4BQ07343 736 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 KCTD2Q14681 263 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 PPP4R3BQ5MIZ7 849 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 ABRAQ8N0Z2 381 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 STK11IPQ8N1F8 1099 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 ARRDC4Q8NCT1 418 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 SIPA1L1O43166 1804 aa15.01□□□□□ -0.01
SNX1-209ENST00000559961 PATL2C9JE40 543 aaKnown RBP15□□□□□ -0.01
SNX1-209ENST00000559961 GPAA1O43292 621 aa15□□□□□ -0.01
SNX1-209ENST00000559961 EVX2Q03828 476 aa15□□□□□ -0.01
SNX1-209ENST00000559961 OLFML2BQ68BL8 750 aa15□□□□□ -0.01
SNX1-209ENST00000559961 ATG4CQ96DT6 458 aa15□□□□□ -0.01
SNX1-209ENST00000559961 PRKAG2Q9UGJ0 569 aa15□□□□□ -0.01
SNX1-209ENST00000559961 DDX20Q9UHI6 824 aaKnown RBP15□□□□□ -0.01
SNX1-209ENST00000559961 ISY1Q9ULR0 285 aaKnown RBP15□□□□□ -0.01
SNX1-209ENST00000559961 MYO5AQ9Y4I1 1855 aaKnown RBP14.99□□□□□ -0.01
SNX1-209ENST00000559961 GSG1L2A8MUP6 293 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 ZBED4O75132 1171 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 CYP2C19P33261 490 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 STAT3P40763 770 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 TSHZ3Q63HK5 1081 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 POTEEQ6S8J3 1075 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 CLEC10AQ8IUN9 316 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 OSBP2Q969R2 916 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 MMP19Q99542 508 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 NAPBQ9H115 298 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 NYAP2Q9P242 653 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 STAP2Q9UGK3 403 aa14.99□□□□□ -0.01
SNX1-209ENST00000559961 ZMYND8Q9ULU4 1186 aaPredicted RBP14.99□□□□□ -0.01
SNX1-209ENST00000559961 KBTBD13C9JR72 458 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
SNX1-209ENST00000559961 TSPY3P0CV98 308 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 TSPY8P0CW00 308 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 MX1P20591 662 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
SNX1-209ENST00000559961 FAM83BQ5T0W9 1011 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 LHX8Q68G74 356 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 SIAH1Q8IUQ4 282 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms