RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
HDDC3-204ENST00000559834 TANGO6Q9C0B7 1094 aa11.08□□□□□ -0.64
HDDC3-204ENST00000559834 SPATC1LQ9H0A9 340 aa11.08□□□□□ -0.64
HDDC3-204ENST00000559834 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
HDDC3-204ENST00000559834 ARHGEF10LQ9HCE6 1279 aa11.08□□□□□ -0.64
HDDC3-204ENST00000559834 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
HDDC3-204ENST00000559834 ATP8A2Q9NTI2 1148 aa11.08□□□□□ -0.64
HDDC3-204ENST00000559834 FLRT1Q9NZU1 646 aa11.08□□□□□ -0.64
HDDC3-204ENST00000559834 MYO5AQ9Y4I1 1855 aaKnown RBP11.07□□□□□ -0.64
HDDC3-204ENST00000559834 A0A1W2PRG0 241 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 APBB1O00213 710 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 DNM1LO00429 736 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 ADORA2AP29274 412 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 CYP2C19P33261 490 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 OLFML2BQ68BL8 750 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 SDR42E1Q8WUS8 393 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.07□□□□□ -0.64
HDDC3-204ENST00000559834 BCL11AQ9H165 835 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 MROH8Q9H579 483 aa11.07□□□□□ -0.64
HDDC3-204ENST00000559834 CDK5RAP2Q96SN8 1893 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 TCRBV5S4A2TA0A5A2 114 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 FLOT1O75955 427 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 ERCC3P19447 782 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 DSG3P32926 999 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 MDM2Q00987 491 aaPredicted RBP11.06□□□□□ -0.64
HDDC3-204ENST00000559834 PLS1Q14651 629 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 ABRAQ8N0Z2 381 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 DDX19BQ9UMR2 479 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 STXBP5LQ9Y2K9 1186 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 TMX2Q9Y320 296 aa11.06□□□□□ -0.64
HDDC3-204ENST00000559834 DDX60LQ5H9U9 1706 aaKnown RBP11.06□□□□□ -0.64
HDDC3-204ENST00000559834 KBTBD13C9JR72 458 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 SLC25A27O95847 323 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 FCER1AP12319 257 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 CYBAP13498 195 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 ATP5JP18859 108 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 ADD2P35612 726 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 ATN1P54259 1190 aaPredicted RBP11.05□□□□□ -0.64
HDDC3-204ENST00000559834 ICA1Q05084 483 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 LCORLQ8N3X6 602 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 BOLA2Q9H3K6 86 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 VCPKMTQ9H867 229 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 ARMT1Q9H993 441 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 KANSL2Q9H9L4 492 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 PAG1Q9NWQ8 432 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 MTMR10Q9NXD2 777 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 ALPK3Q96L96 1907 aa11.05□□□□□ -0.64
HDDC3-204ENST00000559834 WDR46O15213 610 aaKnown RBP11.04□□□□□ -0.64
HDDC3-204ENST00000559834 SEPT4O43236 478 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 COBLO75128 1261 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 MBD4O95243 580 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 IGHA2P01877 340 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 CYP2D6P10635 497 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 CDK8P49336 464 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 UBE3CQ15386 1083 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 GJC2Q5T442 439 aaPredicted RBP11.04□□□□□ -0.64
HDDC3-204ENST00000559834 C12orf60Q5U649 245 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 ZSCAN25Q6NSZ9 544 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 SLC39A5Q6ZMH5 540 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 Q7L0L9 218 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 SPICE1Q8N0Z3 855 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 MIER1Q8N108 512 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 SLC44A5Q8NCS7 719 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 TRPV1Q8NER1 839 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 DYNLL2Q96FJ2 89 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 ZBTB40Q9NUA8 1239 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 ZBED9Q6R2W3 1325 aa11.04□□□□□ -0.64
HDDC3-204ENST00000559834 USP17L12C9JPN9 530 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 USP17L21D6R901 530 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 PRKAB2O43741 272 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 MYCNP04198 464 aaPredicted RBP11.03□□□□□ -0.64
HDDC3-204ENST00000559834 AKR1B1P15121 316 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 RTP1P59025 263 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 FAM109BQ6ICB4 259 aaPredicted RBP11.03□□□□□ -0.64
HDDC3-204ENST00000559834 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
HDDC3-204ENST00000559834 SIAH1Q8IUQ4 282 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 ATG4CQ96DT6 458 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 HAUS7Q99871 368 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 NRBP1Q9UHY1 535 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 ATP11BQ9Y2G3 1177 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 COG6Q9Y2V7 657 aa11.03□□□□□ -0.64
HDDC3-204ENST00000559834 POTEB2H3BUK9 544 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 EEF2P13639 858 aaKnown RBP11.02□□□□□ -0.65
HDDC3-204ENST00000559834 COPB2P35606 906 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 STAT3P40763 770 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 EVX2Q03828 476 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 KCTD2Q14681 263 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 KIAA1755Q5JYT7 1200 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 PRAMEF19Q5SWL8 479 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 C16orf86Q6ZW13 317 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 SIRT2Q8IXJ6 389 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 MAML3Q96JK9 1138 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 ADAMTS5Q9UNA0 930 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 DIS3Q9Y2L1 958 aaKnown RBP11.02□□□□□ -0.65
HDDC3-204ENST00000559834 SLC4A4Q9Y6R1 1079 aa11.02□□□□□ -0.65
HDDC3-204ENST00000559834 RAD21O60216 631 aa11.01□□□□□ -0.65
HDDC3-204ENST00000559834 RARBP10826 455 aa11.01□□□□□ -0.65
HDDC3-204ENST00000559834 ADCYAP1R1P41586 468 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms