RNA–Protein interactions for RNA: ENST00000559827.1

LINS1-206, Transcript of lines homolog 1, humanhuman

TSL 4

Gene LINS1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-206ENST00000559827 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
LINS1-206ENST00000559827 TRDNQ13061 729 aa23.15■■□□□ 1.3
LINS1-206ENST00000559827 TAF1CQ15572 869 aaPredicted RBP23.15■■□□□ 1.3
LINS1-206ENST00000559827 NOM1Q5C9Z4 860 aaKnown RBP23.15■■□□□ 1.3
LINS1-206ENST00000559827 NCOA7Q8NI08 942 aa23.15■■□□□ 1.3
LINS1-206ENST00000559827 GOPCQ9HD26 462 aa23.15■■□□□ 1.3
LINS1-206ENST00000559827 ZSWIM5Q9P217 1185 aa23.15■■□□□ 1.3
LINS1-206ENST00000559827 CLIP2Q9UDT6 1046 aa23.15■■□□□ 1.3
LINS1-206ENST00000559827 FOXN1O15353 648 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 HSPA4P34932 840 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 ATP2B2Q01814 1243 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 CRHR2Q13324 411 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 CCDC178Q5BJE1 867 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 KIAA1755Q5JYT7 1200 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 RCSD1Q6JBY9 416 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 IQCA1Q86XH1 822 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 GMCL1P1Q8NEA9 526 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 TTC14Q96N46 770 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 PARK7Q99497 189 aaKnown RBP23.14■■□□□ 1.29
LINS1-206ENST00000559827 PNMA3Q9UL41 463 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 STX8Q9UNK0 236 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 RLFQ13129 1914 aa23.14■■□□□ 1.29
LINS1-206ENST00000559827 WDR46O15213 610 aaKnown RBP23.13■■□□□ 1.29
LINS1-206ENST00000559827 RALYLQ86SE5 291 aaKnown RBP23.13■■□□□ 1.29
LINS1-206ENST00000559827 MB21D2Q8IYB1 491 aaPredicted RBP23.13■■□□□ 1.29
LINS1-206ENST00000559827 USP26Q9BXU7 913 aa23.13■■□□□ 1.29
LINS1-206ENST00000559827 ZFYVE28Q9HCC9 887 aa23.13■■□□□ 1.29
LINS1-206ENST00000559827 A0A0G2JMZ2 1700 aa23.12■■□□□ 1.29
LINS1-206ENST00000559827 C8orf34Q49A92 452 aa23.12■■□□□ 1.29
LINS1-206ENST00000559827 DGKHQ86XP1 1220 aa23.12■■□□□ 1.29
LINS1-206ENST00000559827 ANKS1AQ92625 1134 aa23.12■■□□□ 1.29
LINS1-206ENST00000559827 USP17L15C9J2P7 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 USP17L13C9JLJ4 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 USP17L11C9JVI0 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 USP17L18D6R9N7 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 USP17L22D6RA61 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 USP17L17D6RBQ6 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 USP17L19D6RCP7 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 USP17L20D6RJB6 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 TLR2O60603 784 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 HSPA8P11142 646 aaKnown RBP23.11■■□□□ 1.29
LINS1-206ENST00000559827 ZKSCAN1P17029 563 aaPredicted RBP23.11■■□□□ 1.29
LINS1-206ENST00000559827 CTCFP49711 727 aaPredicted RBP23.11■■□□□ 1.29
LINS1-206ENST00000559827 USP17L24Q0WX57 530 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 CYB5R4Q7L1T6 521 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 RASEFQ8IZ41 740 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 LRRC47Q8N1G4 583 aaKnown RBP23.11■■□□□ 1.29
LINS1-206ENST00000559827 ZSCAN10Q96SZ4 725 aaPredicted RBP23.11■■□□□ 1.29
LINS1-206ENST00000559827 ASCC2Q9H1I8 757 aaPredicted RBP23.11■■□□□ 1.29
LINS1-206ENST00000559827 R3HDMLQ9H3Y0 253 aa23.11■■□□□ 1.29
LINS1-206ENST00000559827 RPAP3Q9H6T3 665 aaPredicted RBP23.11■■□□□ 1.29
LINS1-206ENST00000559827 TNKSO95271 1327 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 F5H6K3 240 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 TBC1D8O95759 1140 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 NDUFB10O96000 172 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 CYP2C8P10632 490 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 TOP1P11387 765 aaKnown RBP23.1■■□□□ 1.29
LINS1-206ENST00000559827 OSBPP22059 807 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 KLRC3Q07444 240 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 KRT32Q14532 448 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 CATSPERGQ6ZRH7 1159 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 ENAHQ8N8S7 591 aaPredicted RBP23.1■■□□□ 1.29
LINS1-206ENST00000559827 ZKSCAN3Q9BRR0 538 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 MTA3Q9BTC8 594 aa23.1■■□□□ 1.29
LINS1-206ENST00000559827 ANTXR2P58335 489 aa23.09■■□□□ 1.29
LINS1-206ENST00000559827 SEC23AQ15436 765 aa23.09■■□□□ 1.29
LINS1-206ENST00000559827 SPICE1Q8N0Z3 855 aa23.09■■□□□ 1.29
LINS1-206ENST00000559827 GMCL1Q96IK5 515 aa23.09■■□□□ 1.29
LINS1-206ENST00000559827 TMEM47Q9BQJ4 181 aa23.09■■□□□ 1.29
LINS1-206ENST00000559827 UBAC1Q9BSL1 405 aa23.09■■□□□ 1.29
LINS1-206ENST00000559827 IRX3P78415 501 aaPredicted RBP23.08■■□□□ 1.29
LINS1-206ENST00000559827 LBX2Q6XYB7 198 aa23.08■■□□□ 1.29
LINS1-206ENST00000559827 TNS4Q8IZW8 715 aa23.08■■□□□ 1.29
LINS1-206ENST00000559827 TSKSQ9UJT2 592 aa23.08■■□□□ 1.29
LINS1-206ENST00000559827 SNX14Q9Y5W7 946 aa23.08■■□□□ 1.29
LINS1-206ENST00000559827 MYPNQ86TC9 1320 aa23.08■■□□□ 1.28
LINS1-206ENST00000559827 GPR25O00155 361 aa23.07■■□□□ 1.28
LINS1-206ENST00000559827 BCRP11274 1271 aa23.07■■□□□ 1.28
LINS1-206ENST00000559827 C17orf99Q6UX52 265 aa23.07■■□□□ 1.28
LINS1-206ENST00000559827 GTF3C2Q8WUA4 911 aaPredicted RBP23.07■■□□□ 1.28
LINS1-206ENST00000559827 WDR19Q8NEZ3 1342 aa23.07■■□□□ 1.28
LINS1-206ENST00000559827 MCM5P33992 734 aa23.06■■□□□ 1.28
LINS1-206ENST00000559827 GCLCP48506 637 aaPredicted RBP23.06■■□□□ 1.28
LINS1-206ENST00000559827 HERVK_113P62684 666 aa23.06■■□□□ 1.28
LINS1-206ENST00000559827 COL9A3Q14050 684 aaPredicted RBP23.06■■□□□ 1.28
LINS1-206ENST00000559827 ADCK5Q3MIX3 580 aa23.06■■□□□ 1.28
LINS1-206ENST00000559827 SLFN13Q68D06 897 aa23.06■■□□□ 1.28
LINS1-206ENST00000559827 SMCR8Q8TEV9 937 aaPredicted RBP23.06■■□□□ 1.28
LINS1-206ENST00000559827 NEK1Q96PY6 1258 aa23.06■■□□□ 1.28
LINS1-206ENST00000559827 TANGO6Q9C0B7 1094 aa23.06■■□□□ 1.28
LINS1-206ENST00000559827 SNHG28P0DPA3 235 aa23.05■■□□□ 1.28
LINS1-206ENST00000559827 MCCP23508 829 aa23.05■■□□□ 1.28
LINS1-206ENST00000559827 SART3Q15020 963 aaKnown RBP23.05■■□□□ 1.28
LINS1-206ENST00000559827 FAM83BQ5T0W9 1011 aa23.05■■□□□ 1.28
LINS1-206ENST00000559827 P2RX7Q99572 595 aaKnown RBP23.05■■□□□ 1.28
LINS1-206ENST00000559827 SPDYE16A6NNV3 312 aaPredicted RBP23.04■■□□□ 1.28
LINS1-206ENST00000559827 PRC1O43663 620 aa23.04■■□□□ 1.28
LINS1-206ENST00000559827 CAPN15O75808 1086 aa23.04■■□□□ 1.28
LINS1-206ENST00000559827 SEC24BO95487 1268 aa23.04■■□□□ 1.28
LINS1-206ENST00000559827 HMGB1P09429 215 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms