RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 USP17L21D6R901 530 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 PTPREP23469 700 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 CDK8P49336 464 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 EVX2Q03828 476 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 MFSD14CQ5VZR4 134 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 POTEEQ6S8J3 1075 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 C16orf86Q6ZW13 317 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 KBTBD3Q8NAB2 608 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 NBPF3Q9H094 633 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 OGDHLQ9ULD0 1010 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 ZFYP08048 801 aaPredicted RBP14.72□□□□□ -0.05
SPG11-219ENST00000559822 AKR1B1P15121 316 aa14.72□□□□□ -0.05
SPG11-219ENST00000559822 FXR1P51114 621 aaKnown RBP eCLIP14.72□□□□□ -0.05
SPG11-219ENST00000559822 SLFNL1Q499Z3 407 aa14.72□□□□□ -0.05
SPG11-219ENST00000559822 GIMAP6Q6P9H5 292 aa14.72□□□□□ -0.05
SPG11-219ENST00000559822 PUS7LQ9H0K6 701 aaKnown RBP14.72□□□□□ -0.05
SPG11-219ENST00000559822 VCPKMTQ9H867 229 aa14.72□□□□□ -0.05
SPG11-219ENST00000559822 BTBD7Q9P203 1132 aa14.72□□□□□ -0.05
SPG11-219ENST00000559822 TMX2Q9Y320 296 aa14.72□□□□□ -0.05
SPG11-219ENST00000559822 WDR46O15213 610 aaKnown RBP14.71□□□□□ -0.05
SPG11-219ENST00000559822 STRNO43815 780 aa14.71□□□□□ -0.05
SPG11-219ENST00000559822 HOXC6P09630 235 aa14.71□□□□□ -0.05
SPG11-219ENST00000559822 CACNB2Q08289 660 aaPredicted RBP14.71□□□□□ -0.05
SPG11-219ENST00000559822 GRB14Q14449 540 aa14.71□□□□□ -0.05
SPG11-219ENST00000559822 SHCBP1Q8NEM2 672 aa14.71□□□□□ -0.05
SPG11-219ENST00000559822 APPBP2Q92624 585 aa14.71□□□□□ -0.05
SPG11-219ENST00000559822 SPATC1LQ9H0A9 340 aa14.71□□□□□ -0.05
SPG11-219ENST00000559822 C11orf49Q9H6J7 331 aa14.71□□□□□ -0.05
SPG11-219ENST00000559822 KANSL2Q9H9L4 492 aa14.71□□□□□ -0.05
SPG11-219ENST00000559822 TTC41PQ6P2S7 1318 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 CYP2D7A0A087X1C5 515 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 ERC2O15083 957 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 FLOT1O75955 427 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 GNAT2P19087 354 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 DSG3P32926 999 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 CCL14Q16627 93 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 CTR9Q6PD62 1173 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 DIS3LQ8TF46 1054 aaKnown RBP14.7□□□□□ -0.06
SPG11-219ENST00000559822 STRBPQ96SI9 672 aaKnown RBP14.7□□□□□ -0.06
SPG11-219ENST00000559822 GOPCQ9HD26 462 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 SLC5A4Q9NY91 659 aa14.7□□□□□ -0.06
SPG11-219ENST00000559822 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 ZNF236Q9UL36 1845 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 A0A1W2PPC1 479 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 RNF113AO15541 343 aaKnown RBP14.69□□□□□ -0.06
SPG11-219ENST00000559822 MSCO60682 206 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 CHGBP05060 677 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 SBK1Q52WX2 424 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 DPP9Q86TI2 863 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 MOV10L1Q9BXT6 1211 aaKnown RBP14.69□□□□□ -0.06
SPG11-219ENST00000559822 MROH8Q9H579 483 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 ZNF287Q9HBT7 754 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 RBM27Q9P2N5 1060 aaKnown RBP14.69□□□□□ -0.06
SPG11-219ENST00000559822 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
SPG11-219ENST00000559822 TRIOBPQ9H2D6 2365 aa14.69□□□□□ -0.06
SPG11-219ENST00000559822 EEF2P13639 858 aaKnown RBP14.68□□□□□ -0.06
SPG11-219ENST00000559822 CCND3P30281 292 aaPredicted RBP14.68□□□□□ -0.06
SPG11-219ENST00000559822 PLS1Q14651 629 aa14.68□□□□□ -0.06
SPG11-219ENST00000559822 CLEC10AQ8IUN9 316 aa14.68□□□□□ -0.06
SPG11-219ENST00000559822 SIAH1Q8IUQ4 282 aa14.68□□□□□ -0.06
SPG11-219ENST00000559822 ABRAQ8N0Z2 381 aa14.68□□□□□ -0.06
SPG11-219ENST00000559822 SPICE1Q8N0Z3 855 aa14.68□□□□□ -0.06
SPG11-219ENST00000559822 MKNK2Q9HBH9 465 aa14.68□□□□□ -0.06
SPG11-219ENST00000559822 ROBO3Q96MS0 1386 aa14.68□□□□□ -0.06
SPG11-219ENST00000559822 GSG1L2A8MUP6 293 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 GPAA1O43292 621 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 SLC25A27O95847 323 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 ERCC3P19447 782 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 ADORA2AP29274 412 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 TDO2P48775 406 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 KIAA1755Q5JYT7 1200 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 TSHZ3Q63HK5 1081 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 LHX8Q68G74 356 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 C7orf61Q8IZ16 206 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 OSBP2Q969R2 916 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 ATG4CQ96DT6 458 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 PRO3102Q9H379 93 aa14.67□□□□□ -0.06
SPG11-219ENST00000559822 RLFQ13129 1914 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 MINDY4BA8MYZ0 360 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 RAD21O60216 631 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 APPP05067 770 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 CNGA1P29973 690 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 COPB2P35606 906 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
SPG11-219ENST00000559822 OLFML2BQ68BL8 750 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 NCAPG2Q86XI2 1143 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 NACAP1Q9BZK3 213 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 FLRT1Q9NZU1 646 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 ALPK3Q96L96 1907 aa14.66□□□□□ -0.06
SPG11-219ENST00000559822 SMIM22K7EJ46 135 aa14.65□□□□□ -0.06
SPG11-219ENST00000559822 FCER1AP12319 257 aa14.65□□□□□ -0.06
SPG11-219ENST00000559822 RASA1P20936 1047 aa14.65□□□□□ -0.06
SPG11-219ENST00000559822 RRP1P56182 461 aaKnown RBP14.65□□□□□ -0.06
SPG11-219ENST00000559822 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
SPG11-219ENST00000559822 NPLOC4Q8TAT6 608 aa14.65□□□□□ -0.06
SPG11-219ENST00000559822 FSD1Q9BTV5 496 aa14.65□□□□□ -0.06
SPG11-219ENST00000559822 DDX20Q9UHI6 824 aaKnown RBP14.65□□□□□ -0.06
SPG11-219ENST00000559822 PCDHB15Q9Y5E8 787 aa14.65□□□□□ -0.06
SPG11-219ENST00000559822 GREB1LQ9C091 1923 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms