RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 SH2B2O14492 632 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-215ENST00000559774 EVCP57679 992 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 SREBF2Q12772 1141 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 WTAPQ15007 396 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 PPP2R5BQ15173 497 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 TMEM67Q5HYA8 995 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 GMCL1Q96IK5 515 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 MS4A4AQ96JQ5 239 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 VCPKMTQ9H867 229 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 KAT14Q9H8E8 782 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 TMOD4Q9NZQ9 345 aa10.19□□□□□ -0.78
LRRC28-215ENST00000559774 GREB1LQ9C091 1923 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-215ENST00000559774 A0A1W2PRG0 241 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 F5H6K3 240 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 NMT2O60551 498 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 PLA2G6O60733 806 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 CALM1P0DP23 149 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 CALM2P0DP24 149 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 CALM3P0DP25 149 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 HOXA7P31268 230 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-215ENST00000559774 GJA5P36382 358 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 TM4SF4P48230 202 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 KLRC3Q07444 240 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 PABPC4Q13310 644 aaKnown RBP eCLIP10.18□□□□□ -0.78
LRRC28-215ENST00000559774 SHROOM1Q2M3G4 852 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-215ENST00000559774 CHMP4CQ96CF2 233 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 CAPNS2Q96L46 248 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 KIF2CQ99661 725 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 FEZ1Q99689 392 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 TMEM47Q9BQJ4 181 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 LY9Q9HBG7 655 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 PDRG1Q9NUG6 133 aa10.18□□□□□ -0.78
LRRC28-215ENST00000559774 DOCK1Q14185 1865 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 CCDC69A6NI79 296 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 TRIM75PA6NK02 468 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 WDR46O15213 610 aaKnown RBP10.17□□□□□ -0.78
LRRC28-215ENST00000559774 DDAH1O94760 285 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 ALDH1A1P00352 501 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 SNHG28P0DPA3 235 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 MCM2P49736 904 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 NEK4P51957 841 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 FGD1P98174 961 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 MTMR2Q13614 643 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 GPATCH4Q5T3I0 446 aaKnown RBP10.17□□□□□ -0.78
LRRC28-215ENST00000559774 OTUD7BQ6GQQ9 843 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 SYNE3Q6ZMZ3 975 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 CATIPQ7Z7H3 387 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 ANKRD23Q86SG2 305 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 PNMA1Q8ND90 353 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 ACER1Q8TDN7 264 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 DCAF4Q8WV16 495 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 ZKSCAN3Q9BRR0 538 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 EMILIN3Q9NT22 766 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 AGTPBP1Q9UPW5 1226 aa10.17□□□□□ -0.78
LRRC28-215ENST00000559774 MYPNQ86TC9 1320 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 WDR33Q9C0J8 1336 aaKnown RBP10.16□□□□□ -0.78
LRRC28-215ENST00000559774 CCL15-CCL14A0A0B4J2E2 113 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 ST18O60284 1047 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 FDX1P10109 184 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 SMARCA1P28370 1054 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 HMGCS2P54868 508 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 ATP2B2Q01814 1243 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 TROAPQ12815 778 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 MOGSQ13724 837 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 CCL15Q16663 113 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 ASPRV1Q53RT3 343 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 CYP4F22Q6NT55 531 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 Q6ZUG5 572 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 CHST3Q7LGC8 479 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 GTF3C2Q8WUA4 911 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-215ENST00000559774 ZNF274Q96GC6 653 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-215ENST00000559774 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
LRRC28-215ENST00000559774 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-215ENST00000559774 SLC12A7Q9Y666 1083 aa10.16□□□□□ -0.78
LRRC28-215ENST00000559774 OTOFQ9HC10 1997 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L15C9J2P7 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L13C9JLJ4 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L11C9JVI0 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L18D6R9N7 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L22D6RA61 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L17D6RBQ6 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L19D6RCP7 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L20D6RJB6 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 NDUFB10O96000 172 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 PDHBP11177 359 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 BMP3P12645 472 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 VCAM1P19320 739 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 KIF5BP33176 963 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 SLC1A4P43007 532 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 GNAQP50148 359 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L24Q0WX57 530 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 TOB2Q14106 344 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-215ENST00000559774 SLFN13Q68D06 897 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 APOA5Q6Q788 366 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 LBX2Q6XYB7 198 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-215ENST00000559774 CCDC84Q86UT8 332 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms