RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ARSHQ5FYA8 562 aa6.42□□□□□ -1.38
SPG11-218ENST00000559754 KRTAP1-3Q8IUG1 177 aa6.42□□□□□ -1.38
SPG11-218ENST00000559754 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPG11-218ENST00000559754 METTL5Q9NRN9 209 aaKnown RBP6.42□□□□□ -1.38
SPG11-218ENST00000559754 C19orf73Q9NVV2 129 aa6.42□□□□□ -1.38
SPG11-218ENST00000559754 RBM47A0AV96 593 aaKnown RBP6.41□□□□□ -1.38
SPG11-218ENST00000559754 LRRC10BA6NIK2 292 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 DNAJA2O60884 412 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 LRRN2O75325 713 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 C8AP07357 584 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 MCM4P33991 863 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 EGR3Q06889 387 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 PKN1Q16512 942 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 CLEC16AQ2KHT3 1053 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 SEZ6Q53EL9 994 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 CDCP2Q5VXM1 449 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 KIAA0825Q8IV33 1275 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 ENOX1Q8TC92 643 aaKnown RBP6.41□□□□□ -1.38
SPG11-218ENST00000559754 DHX38Q92620 1227 aaKnown RBP6.41□□□□□ -1.38
SPG11-218ENST00000559754 NKD1Q969G9 470 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 SLC38A3Q99624 504 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 SPON2Q9BUD6 331 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 UBP1Q9NZI7 540 aa6.41□□□□□ -1.38
SPG11-218ENST00000559754 ZNF503-AS2A6NEH8 195 aa6.4□□□□□ -1.38
SPG11-218ENST00000559754 CCNFP41002 786 aa6.4□□□□□ -1.38
SPG11-218ENST00000559754 CRKP46108 304 aa6.4□□□□□ -1.38
SPG11-218ENST00000559754 FYB2Q5VWT5 728 aa6.4□□□□□ -1.38
SPG11-218ENST00000559754 MPZL3Q6UWV2 235 aa6.4□□□□□ -1.38
SPG11-218ENST00000559754 KSR1Q8IVT5 923 aa6.4□□□□□ -1.38
SPG11-218ENST00000559754 ABHD4Q8TB40 342 aa6.4□□□□□ -1.38
SPG11-218ENST00000559754 CNNM2Q9H8M5 875 aa6.4□□□□□ -1.38
SPG11-218ENST00000559754 DNAJC25-GNG10A0A024R161 153 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 WASH4PA8MWX3 477 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 HK2P52789 917 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 MLANAQ16655 118 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 RALGPS1Q5JS13 557 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 OVOS1Q6IE37 1185 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 GK5Q6ZS86 529 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 SLITRK4Q8IW52 837 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 VWCEQ96DN2 955 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 FAM84AQ96KN4 292 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 BACH2Q9BYV9 841 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 ADAMTS10Q9H324 1103 aa6.39□□□□□ -1.39
SPG11-218ENST00000559754 BTBD11A6QL63 1104 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 UBOX5O94941 541 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 HPXP02790 462 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 FANCCQ00597 558 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 CLCQ05315 142 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 ZNF648Q5T619 568 aaPredicted RBP6.38□□□□□ -1.39
SPG11-218ENST00000559754 LDLRAD1Q5T700 205 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 NLRC3Q7RTR2 1065 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 USP48Q86UV5 1035 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 OXR1Q8N573 874 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 BHLHE22Q8NFJ8 381 aaPredicted RBP6.38□□□□□ -1.39
SPG11-218ENST00000559754 MYLIPQ8WY64 445 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 RNF34Q969K3 372 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 ATG4CQ96DT6 458 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 PCDHA11Q9Y5I1 949 aa6.38□□□□□ -1.39
SPG11-218ENST00000559754 MEIS3P2A8K0S8 358 aa6.37□□□□□ -1.39
SPG11-218ENST00000559754 CLEC3AO75596 197 aa6.37□□□□□ -1.39
SPG11-218ENST00000559754 IMPDH2P12268 514 aa6.37□□□□□ -1.39
SPG11-218ENST00000559754 VAMP1P23763 118 aa6.37□□□□□ -1.39
SPG11-218ENST00000559754 DUSP4Q13115 394 aa6.37□□□□□ -1.39
SPG11-218ENST00000559754 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
SPG11-218ENST00000559754 LILRA2Q8N149 483 aa6.37□□□□□ -1.39
SPG11-218ENST00000559754 PDZD8Q8NEN9 1154 aa6.37□□□□□ -1.39
SPG11-218ENST00000559754 SYTL5Q8TDW5 730 aaPredicted RBP6.37□□□□□ -1.39
SPG11-218ENST00000559754 LIN37Q96GY3 246 aaPredicted RBP6.37□□□□□ -1.39
SPG11-218ENST00000559754 EAF1Q96JC9 268 aaPredicted RBP6.37□□□□□ -1.39
SPG11-218ENST00000559754 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPG11-218ENST00000559754 FITM1A5D6W6 292 aa6.36□□□□□ -1.39
SPG11-218ENST00000559754 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.36□□□□□ -1.39
SPG11-218ENST00000559754 RBAK-RBAKDNI3L0D1 243 aa6.36□□□□□ -1.39
SPG11-218ENST00000559754 ZGLP1P0C6A0 271 aa6.36□□□□□ -1.39
SPG11-218ENST00000559754 NME1P15531 152 aaKnown RBP6.36□□□□□ -1.39
SPG11-218ENST00000559754 NBPF12Q5TAG4 269 aaPredicted RBP6.36□□□□□ -1.39
SPG11-218ENST00000559754 SPPL2CQ8IUH8 684 aa6.36□□□□□ -1.39
SPG11-218ENST00000559754 DAGLBQ8NCG7 672 aa6.36□□□□□ -1.39
SPG11-218ENST00000559754 PPP1R16BQ96T49 567 aa6.36□□□□□ -1.39
SPG11-218ENST00000559754 SHISA3A0PJX4 238 aa6.35□□□□□ -1.39
SPG11-218ENST00000559754 TNFRSF10CO14798 259 aa6.35□□□□□ -1.39
SPG11-218ENST00000559754 POLR2BP30876 1174 aaKnown RBP6.35□□□□□ -1.39
SPG11-218ENST00000559754 CHRNEQ04844 493 aa6.35□□□□□ -1.39
SPG11-218ENST00000559754 MESP2Q0VG99 397 aa6.35□□□□□ -1.39
SPG11-218ENST00000559754 NBPF9Q3BBW0 867 aa6.35□□□□□ -1.39
SPG11-218ENST00000559754 RNF111Q6ZNA4 994 aa6.35□□□□□ -1.39
SPG11-218ENST00000559754 ZNF655Q8N720 491 aaPredicted RBP6.35□□□□□ -1.39
SPG11-218ENST00000559754 HDAC8Q9BY41 377 aa6.35□□□□□ -1.39
SPG11-218ENST00000559754 SSU72P8A0A1W2PR75 194 aa6.34□□□□□ -1.39
SPG11-218ENST00000559754 SCAMP3O14828 347 aaKnown RBP6.34□□□□□ -1.39
SPG11-218ENST00000559754 TEKQ02763 1124 aa6.34□□□□□ -1.39
SPG11-218ENST00000559754 FZD5Q13467 585 aa6.34□□□□□ -1.39
SPG11-218ENST00000559754 NR0B2Q15466 257 aa6.34□□□□□ -1.39
SPG11-218ENST00000559754 INTS3Q68E01 1043 aaKnown RBP6.34□□□□□ -1.39
SPG11-218ENST00000559754 ANKS4BQ8N8V4 417 aa6.34□□□□□ -1.39
SPG11-218ENST00000559754 DBX1A6NMT0 343 aa6.33□□□□□ -1.4
SPG11-218ENST00000559754 ERVFC1P60507 584 aa6.33□□□□□ -1.4
SPG11-218ENST00000559754 ZNF394Q53GI3 561 aa6.33□□□□□ -1.4
SPG11-218ENST00000559754 PRR23BQ6ZRT6 265 aa6.33□□□□□ -1.4
SPG11-218ENST00000559754 FBXO15Q8NCQ5 510 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms