RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 VCPKMTQ9H867 229 aa15.37■□□□□ 0.05
BMP4-208ENST00000559642 KANSL2Q9H9L4 492 aa15.37■□□□□ 0.05
BMP4-208ENST00000559642 RBPJLQ9UBG7 517 aa15.37■□□□□ 0.05
BMP4-208ENST00000559642 TMX2Q9Y320 296 aa15.37■□□□□ 0.05
BMP4-208ENST00000559642 LAMA4Q16363 1823 aa15.37■□□□□ 0.05
BMP4-208ENST00000559642 CCDC171Q6TFL3 1326 aa15.37■□□□□ 0.05
BMP4-208ENST00000559642 CENPFP49454 3210 aa15.37■□□□□ 0.05
BMP4-208ENST00000559642 SPDYE16A6NNV3 312 aaPredicted RBP15.36■□□□□ 0.05
BMP4-208ENST00000559642 CNMDO75829 334 aa15.36■□□□□ 0.05
BMP4-208ENST00000559642 GSPT1P15170 499 aaKnown RBP15.36■□□□□ 0.05
BMP4-208ENST00000559642 ERVK-9P63128 1117 aa15.36■□□□□ 0.05
BMP4-208ENST00000559642 ERVK-24P63145 666 aa15.36■□□□□ 0.05
BMP4-208ENST00000559642 GPRC5AQ8NFJ5 357 aa15.36■□□□□ 0.05
BMP4-208ENST00000559642 COA7Q96BR5 231 aa15.36■□□□□ 0.05
BMP4-208ENST00000559642 SH2D4AQ9H788 454 aa15.36■□□□□ 0.05
BMP4-208ENST00000559642 COL11A1P12107 1806 aaPredicted RBP15.36■□□□□ 0.05
BMP4-208ENST00000559642 PLIN4Q96Q06 1357 aa15.36■□□□□ 0.05
BMP4-208ENST00000559642 IGKV6D-41A0A0C4DH26 115 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 RAD21O60216 631 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 ELNP15502 786 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 GRK4P32298 578 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 Q3C1V9 767 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 FAM47AQ5JRC9 791 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 TTC22Q5TAA0 569 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 SAMD1Q6SPF0 538 aaPredicted RBP15.35■□□□□ 0.05
BMP4-208ENST00000559642 NBPF11Q86T75 865 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
BMP4-208ENST00000559642 GTF3C2Q8WUA4 911 aaPredicted RBP15.35■□□□□ 0.05
BMP4-208ENST00000559642 LPAR1Q92633 364 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 PORCNQ9H237 461 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 INCENPQ9NQS7 918 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 DIAPH3Q9NSV4 1193 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 TACC3Q9Y6A5 838 aa15.35■□□□□ 0.05
BMP4-208ENST00000559642 ADCY3O60266 1144 aa15.34■□□□□ 0.05
BMP4-208ENST00000559642 SLC3A2P08195 630 aaKnown RBP15.34■□□□□ 0.05
BMP4-208ENST00000559642 HSPD1P10809 573 aaKnown RBP15.34■□□□□ 0.05
BMP4-208ENST00000559642 MLLT1Q03111 559 aaPredicted RBP15.34■□□□□ 0.05
BMP4-208ENST00000559642 PDE4BQ07343 736 aa15.34■□□□□ 0.05
BMP4-208ENST00000559642 MTFR1Q15390 333 aa15.34■□□□□ 0.05
BMP4-208ENST00000559642 CWC27Q6UX04 472 aaKnown RBP15.34■□□□□ 0.05
BMP4-208ENST00000559642 TICAM2Q86XR7 235 aa15.34■□□□□ 0.05
BMP4-208ENST00000559642 CEP95Q96GE4 821 aa15.34■□□□□ 0.05
BMP4-208ENST00000559642 ZNF287Q9HBT7 754 aa15.34■□□□□ 0.05
BMP4-208ENST00000559642 BTBD7Q9P203 1132 aa15.34■□□□□ 0.05
BMP4-208ENST00000559642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
BMP4-208ENST00000559642 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.04
BMP4-208ENST00000559642 FLOT1O75955 427 aa15.33■□□□□ 0.04
BMP4-208ENST00000559642 FGAP02671 866 aa15.33■□□□□ 0.04
BMP4-208ENST00000559642 ALX1Q15699 326 aa15.33■□□□□ 0.04
BMP4-208ENST00000559642 LBX2Q6XYB7 198 aa15.33■□□□□ 0.04
BMP4-208ENST00000559642 LRRC47Q8N1G4 583 aaKnown RBP15.33■□□□□ 0.04
BMP4-208ENST00000559642 SLAIN1Q8ND83 568 aa15.33■□□□□ 0.04
BMP4-208ENST00000559642 NUP88Q99567 741 aaPredicted RBP15.33■□□□□ 0.04
BMP4-208ENST00000559642 GOPCQ9HD26 462 aa15.33■□□□□ 0.04
BMP4-208ENST00000559642 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
BMP4-208ENST00000559642 RABGAP1Q9Y3P9 1069 aa15.33■□□□□ 0.04
BMP4-208ENST00000559642 TSPY3P0CV98 308 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 TSPY8P0CW00 308 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 HAND2P61296 217 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 TFAP4Q01664 338 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 IRF5Q13568 498 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 COG2Q14746 738 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 FAM83BQ5T0W9 1011 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 NEDD1Q8NHV4 660 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 ATG4CQ96DT6 458 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 IL25Q9H293 177 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 FBXO28Q9NVF7 368 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 NYAP2Q9P242 653 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 CLIP2Q9UDT6 1046 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 ANAPC4Q9UJX5 808 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 GJD2Q9UKL4 321 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 ZMYM6O95789 1325 aa15.32■□□□□ 0.04
BMP4-208ENST00000559642 BRCA2P51587 3418 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 HIP1O00291 1037 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 NDUFB10O96000 172 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 INHAP05111 366 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 EN2P19622 333 aaPredicted RBP15.31■□□□□ 0.04
BMP4-208ENST00000559642 MAPK4P31152 587 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 WDR78Q5VTH9 848 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 GPR142Q7Z601 462 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 SKAP1Q86WV1 359 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 CCAR1Q8IX12 1150 aaKnown RBP15.31■□□□□ 0.04
BMP4-208ENST00000559642 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 CWC22Q9HCG8 908 aaKnown RBP15.31■□□□□ 0.04
BMP4-208ENST00000559642 MTMR4Q9NYA4 1195 aa15.31■□□□□ 0.04
BMP4-208ENST00000559642 TSPY2A6NKD2 308 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 NMT2O60551 498 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 TTLL1O95922 423 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 CCL5P13501 91 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 CYP2B6P20813 491 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 DSG3P32926 999 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
BMP4-208ENST00000559642 CCNA1P78396 465 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 RRP12Q5JTH9 1297 aaKnown RBP15.3■□□□□ 0.04
BMP4-208ENST00000559642 PLEKHH3Q7Z736 793 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 TBC1D10CQ8IV04 446 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
BMP4-208ENST00000559642 KIAA0100Q14667 2235 aaKnown RBP15.29■□□□□ 0.04
BMP4-208ENST00000559642 ZNF236Q9UL36 1845 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms