RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 KDM4AO75164 1064 aa23.96■■□□□ 1.43
TSPAN3-207ENST00000559494 OSBPP22059 807 aa23.96■■□□□ 1.43
TSPAN3-207ENST00000559494 STOX1Q6ZVD7 989 aa23.96■■□□□ 1.43
TSPAN3-207ENST00000559494 SPICE1Q8N0Z3 855 aa23.96■■□□□ 1.43
TSPAN3-207ENST00000559494 PARK7Q99497 189 aaKnown RBP23.96■■□□□ 1.43
TSPAN3-207ENST00000559494 PRDM10Q9NQV6 1147 aa23.96■■□□□ 1.43
TSPAN3-207ENST00000559494 ZSWIM5Q9P217 1185 aa23.96■■□□□ 1.43
TSPAN3-207ENST00000559494 MYH4Q9Y623 1939 aa23.96■■□□□ 1.43
TSPAN3-207ENST00000559494 USP17L15C9J2P7 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 USP17L13C9JLJ4 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 USP17L11C9JVI0 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 USP17L18D6R9N7 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 USP17L22D6RA61 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 USP17L17D6RBQ6 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 USP17L19D6RCP7 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 USP17L20D6RJB6 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 E7EWF7 191 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 SLC27A2O14975 620 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 USP17L24Q0WX57 530 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 CREB3L3Q68CJ9 461 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 C17orf99Q6UX52 265 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 CATSPERGQ6ZRH7 1159 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 ZNF296Q8WUU4 475 aaPredicted RBP23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 P2RX7Q99572 595 aaKnown RBP23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 KRT23Q9C075 422 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 RPAP3Q9H6T3 665 aaPredicted RBP23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 CNNM2Q9H8M5 875 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 CPA4Q9UI42 421 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 PNMA3Q9UL41 463 aa23.95■■□□□ 1.42
TSPAN3-207ENST00000559494 NT5C2P49902 561 aa23.94■■□□□ 1.42
TSPAN3-207ENST00000559494 LPAR1Q92633 364 aa23.94■■□□□ 1.42
TSPAN3-207ENST00000559494 ZKSCAN3Q9BRR0 538 aa23.94■■□□□ 1.42
TSPAN3-207ENST00000559494 GOPCQ9HD26 462 aa23.94■■□□□ 1.42
TSPAN3-207ENST00000559494 STX8Q9UNK0 236 aa23.94■■□□□ 1.42
TSPAN3-207ENST00000559494 F5H6K3 240 aa23.93■■□□□ 1.42
TSPAN3-207ENST00000559494 IRX3P78415 501 aaPredicted RBP23.93■■□□□ 1.42
TSPAN3-207ENST00000559494 KLRC3Q07444 240 aa23.93■■□□□ 1.42
TSPAN3-207ENST00000559494 PPP4R3BQ5MIZ7 849 aa23.93■■□□□ 1.42
TSPAN3-207ENST00000559494 LRRC47Q8N1G4 583 aaKnown RBP23.93■■□□□ 1.42
TSPAN3-207ENST00000559494 FKTNO75072 461 aa23.92■■□□□ 1.42
TSPAN3-207ENST00000559494 RCSD1Q6JBY9 416 aa23.92■■□□□ 1.42
TSPAN3-207ENST00000559494 CYB5R4Q7L1T6 521 aa23.92■■□□□ 1.42
TSPAN3-207ENST00000559494 SYNPO2Q9UMS6 1093 aa23.92■■□□□ 1.42
TSPAN3-207ENST00000559494 WDR46O15213 610 aaKnown RBP23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 RAD21O60216 631 aa23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 NDUFB10O96000 172 aa23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 BCRP11274 1271 aa23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 SP3Q02447 781 aa23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 TRDNQ13061 729 aa23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 POTEEQ6S8J3 1075 aa23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 SMCR8Q8TEV9 937 aaPredicted RBP23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 TTC14Q96N46 770 aa23.91■■□□□ 1.42
TSPAN3-207ENST00000559494 REC8O95072 547 aa23.9■■□□□ 1.42
TSPAN3-207ENST00000559494 HERVK_113P62684 666 aa23.9■■□□□ 1.42
TSPAN3-207ENST00000559494 GMCL1P1Q8NEA9 526 aa23.9■■□□□ 1.42
TSPAN3-207ENST00000559494 NCOA7Q8NI08 942 aa23.9■■□□□ 1.42
TSPAN3-207ENST00000559494 NUP88Q99567 741 aaPredicted RBP23.9■■□□□ 1.42
TSPAN3-207ENST00000559494 TMEM47Q9BQJ4 181 aa23.9■■□□□ 1.42
TSPAN3-207ENST00000559494 CAP1Q01518 475 aa23.89■■□□□ 1.42
TSPAN3-207ENST00000559494 FAM83BQ5T0W9 1011 aa23.89■■□□□ 1.42
TSPAN3-207ENST00000559494 SLFN13Q68D06 897 aa23.89■■□□□ 1.42
TSPAN3-207ENST00000559494 IQCA1Q86XH1 822 aa23.89■■□□□ 1.42
TSPAN3-207ENST00000559494 RASEFQ8IZ41 740 aa23.89■■□□□ 1.42
TSPAN3-207ENST00000559494 TANGO6Q9C0B7 1094 aa23.89■■□□□ 1.42
TSPAN3-207ENST00000559494 TOP1P11387 765 aaKnown RBP23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 GCLCP48506 637 aaPredicted RBP23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 COL9A3Q14050 684 aaPredicted RBP23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 COG2Q14746 738 aa23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 CCDC178Q5BJE1 867 aa23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 DGKHQ86XP1 1220 aa23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 ANKRD13CQ8N6S4 541 aa23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 ANKS1AQ92625 1134 aa23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 ZSCAN10Q96SZ4 725 aaPredicted RBP23.88■■□□□ 1.41
TSPAN3-207ENST00000559494 PEX10O60683 326 aa23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 TSGA10IPQ3SY00 556 aa23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 RNF20Q5VTR2 975 aa23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 RALYLQ86SE5 291 aaKnown RBP23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 MB21D2Q8IYB1 491 aaPredicted RBP23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 KCNB2Q92953 911 aa23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 USP26Q9BXU7 913 aa23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 RBPJLQ9UBG7 517 aa23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 RLFQ13129 1914 aa23.87■■□□□ 1.41
TSPAN3-207ENST00000559494 SPDYE16A6NNV3 312 aaPredicted RBP23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 MCCP23508 829 aa23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 HSPA4P34932 840 aa23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 CHST3Q7LGC8 479 aa23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 ENAHQ8N8S7 591 aaPredicted RBP23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 CD99L2Q8TCZ2 262 aa23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 CHMP4CQ96CF2 233 aa23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 TXNRD2Q9NNW7 524 aa23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 FBXO28Q9NVF7 368 aa23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 HOXC10Q9NYD6 342 aa23.86■■□□□ 1.41
TSPAN3-207ENST00000559494 FLOT1O75955 427 aa23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 DSG3P32926 999 aa23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 ANTXR2P58335 489 aa23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 SEC23AQ15436 765 aa23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 COL13A1Q5TAT6 717 aaPredicted RBP23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 LBX2Q6XYB7 198 aa23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 RASGRP2Q7LDG7 609 aa23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 UBAC1Q9BSL1 405 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms