RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SYNPO2Q9UMS6 1093 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 TMX2Q9Y320 296 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 RABGAP1Q9Y3P9 1069 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 PTCH2Q9Y6C5 1203 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 IVNS1ABPQ9Y6Y0 642 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 CCDC171Q6TFL3 1326 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 MYPNQ86TC9 1320 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 ADGRA2Q96PE1 1338 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 ROBO3Q96MS0 1386 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 A0A0D9SFI3 127 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 A0A1W2PRG0 241 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 ZNF213O14771 459 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 WDR46O15213 610 aaKnown RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 RANBP6O60518 1105 aaKnown RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 PRDM1O75626 825 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 FGAP02671 866 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 CENPBP07199 599 aaPredicted RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 PCP11498 1178 aaKnown RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 RASA1P20936 1047 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 GRK4P32298 578 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 FLT3LGP49771 235 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 ERVK-9P63128 1117 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 ERVK-24P63145 666 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 UBXN2AP68543 259 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 TFAP4Q01664 338 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 MLLT1Q03111 559 aaPredicted RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 EVX2Q03828 476 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 PRKCZQ05513 592 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 NMIQ13287 307 aaPredicted RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 IRF5Q13568 498 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 ALX1Q15699 326 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 IMMTQ16891 758 aaKnown RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 TTC22Q5TAA0 569 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 WDR78Q5VTH9 848 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 CASC1Q6TDU7 716 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 LBX2Q6XYB7 198 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 CCDC129Q6ZRS4 1044 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 MFSD6Q6ZSS7 791 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 KIAA1211Q6ZU35 1233 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 CENPQQ7L2Z9 268 aaPredicted RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 NKX2-3Q8TAU0 364 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 PXYLP1Q8TE99 480 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 SOCS4Q8WXH5 440 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 ARMC5Q96C12 935 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 CCDC136Q96JN2 1154 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 NUDT12Q9BQG2 462 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 PAGR1Q9BTK6 254 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 SLC5A4Q9NY91 659 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 MTMR4Q9NYA4 1195 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 NYAP2Q9P242 653 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 RBPJLQ9UBG7 517 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 MORF4L1Q9UBU8 362 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 CLIP2Q9UDT6 1046 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 ANAPC4Q9UJX5 808 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 STX8Q9UNK0 236 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 CTDP1Q9Y5B0 961 aaPredicted RBP5.18□□□□□ -1.58
SNX1-205ENST00000559339 ZMYM6O95789 1325 aa5.18□□□□□ -1.58
SNX1-205ENST00000559339 DOCK1Q14185 1865 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 SPDYE16A6NNV3 312 aaPredicted RBP5.17□□□□□ -1.58
SNX1-205ENST00000559339 F5H6K3 240 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 SMIM22K7EJ46 135 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 STRNO43815 780 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 ADCY3O60266 1144 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 MYCP01106 439 aaPredicted RBP5.17□□□□□ -1.58
SNX1-205ENST00000559339 CAPN2P17655 700 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 COPB2P35606 906 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 SLC1A4P43007 532 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 SOX10P56693 466 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 CTDSPL2Q05D32 466 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 KLRC3Q07444 240 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 TRDNQ13061 729 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 IKQ13123 557 aaPredicted RBP5.17□□□□□ -1.58
SNX1-205ENST00000559339 PLS1Q14651 629 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 FAM47AQ5JRC9 791 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 RRP12Q5JTH9 1297 aaKnown RBP5.17□□□□□ -1.58
SNX1-205ENST00000559339 VPS53Q5VIR6 699 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 GPR142Q7Z601 462 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 ZNF589Q86UQ0 364 aaPredicted RBP5.17□□□□□ -1.58
SNX1-205ENST00000559339 IQCA1Q86XH1 822 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 TRMT44Q8IYL2 757 aaKnown RBP5.17□□□□□ -1.58
SNX1-205ENST00000559339 PRPF38AQ8NAV1 312 aaKnown RBP5.17□□□□□ -1.58
SNX1-205ENST00000559339 GMCL1P1Q8NEA9 526 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 NEDD1Q8NHV4 660 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 SH3TC2Q8TF17 1288 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 ESR2Q92731 530 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 CEP95Q96GE4 821 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 ZNF333Q96JL9 665 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 DSCC1Q9BVC3 393 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 TXNRD2Q9NNW7 524 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 ISY1Q9ULR0 285 aaKnown RBP5.17□□□□□ -1.58
SNX1-205ENST00000559339 CENPFP49454 3210 aa5.17□□□□□ -1.58
SNX1-205ENST00000559339 FOCADQ5VW36 1801 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 MYO5AQ9Y4I1 1855 aaKnown RBP5.16□□□□□ -1.58
SNX1-205ENST00000559339 ORC4O43929 436 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 SLC25A27O95847 323 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 NDUFB10O96000 172 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 HMGCRP04035 888 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 FGRP09769 529 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 FDX1P10109 184 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 BMP3P12645 472 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms