RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PMS1P54277 932 aaKnown RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 RAC1P63000 192 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 ERVK-24P63145 666 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 PABPC4Q13310 644 aaKnown RBP eCLIP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 FAM50AQ14320 339 aaKnown RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 SETDB1Q15047 1291 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 LONRF2Q1L5Z9 754 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 PLEKHG6Q3KR16 790 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 FBLN7Q53RD9 439 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 FAM209AQ5JX71 171 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 EXOSC6Q5RKV6 272 aaKnown RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 ODR4Q5SWX8 454 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 TRAPPC3LQ5T215 181 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 CCDC181Q5TID7 509 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 CNNM4Q6P4Q7 775 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 DYMQ7RTS9 669 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 MCATQ8IVS2 390 aaKnown RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 RPUSD2Q8IZ73 545 aaKnown RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 UBR7Q8N806 425 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 KCT2Q8NC54 265 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 GALNT11Q8NCW6 608 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 ATL2Q8NHH9 583 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 UBASH3BQ8TF42 649 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 EDARADDQ8WWZ3 215 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 KLHL6Q8WZ60 621 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 NINJ1Q92982 152 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 SGSM3Q96HU1 749 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 ZNF512BQ96KM6 892 aaPredicted RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 CCDC74BQ96LY2 380 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 FGD4Q96M96 766 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 MDFIQ99750 246 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 AARSD1Q9BTE6 412 aaKnown RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 RUSC1Q9BVN2 902 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 NRSN2Q9GZP1 204 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 GBP3Q9H0R5 595 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 ATXN3LQ9H3M9 355 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 RRAGCQ9HB90 399 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 SUCOQ9UBS9 1254 aaKnown RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 TJP2Q9UDY2 1190 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 MCM8Q9UJA3 840 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 TRBV23-1A0A0A0MS06 115 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 CCDC163A0A0D9SF12 145 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 A0A1W2PQU0 124 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 NOP56O00567 594 aaKnown RBP3.13□□□□□ -1.91
GABPB1-209ENST00000559100 RGS13O14921 159 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 PRODHO43272 600 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 ADCY3O60266 1144 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 PDE8AO60658 829 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 ADAM11O75078 769 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 PPM1BO75688 479 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 DLGAP3O95886 979 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 ITGAVP06756 1048 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 TAL1P17542 331 aaPredicted RBP3.13□□□□□ -1.91
GABPB1-209ENST00000559100 ZNF143P52747 638 aaPredicted RBP3.13□□□□□ -1.91
GABPB1-209ENST00000559100 EVA1CP58658 441 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 NFKB2Q00653 900 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 NOL9Q5SY16 702 aaKnown RBP3.13□□□□□ -1.91
GABPB1-209ENST00000559100 YOD1Q5VVQ6 348 aaPredicted RBP3.13□□□□□ -1.91
GABPB1-209ENST00000559100 PRAMEF13Q5VWM6 474 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 SLC6A19Q695T7 634 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 FDX2Q6P4F2 183 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 C20orf204Q6ZNR8 217 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 ACAD11Q709F0 780 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 KRT26Q7Z3Y9 468 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 TMEM192Q8IY95 271 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 SLFN12Q8IYM2 578 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 JMYQ8N9B5 988 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 C12orf50Q8NA57 414 aaPredicted RBP3.13□□□□□ -1.91
GABPB1-209ENST00000559100 ADCY4Q8NFM4 1077 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 BAHD1Q8TBE0 780 aaPredicted RBP3.13□□□□□ -1.91
GABPB1-209ENST00000559100 HAUS7Q99871 368 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 DHRS4Q9BTZ2 278 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 IRF2BPLQ9H1B7 796 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 CAAP1Q9H8G2 361 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 FBRSQ9HAH7 460 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 CYP4F12Q9HCS2 524 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 CHPF2Q9P2E5 772 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 TCEAL9Q9UHQ7 104 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 PPP1R9AQ9ULJ8 1098 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 ATP8A1Q9Y2Q0 1164 aa3.13□□□□□ -1.91
GABPB1-209ENST00000559100 MRPS23Q9Y3D9 190 aaKnown RBP3.13□□□□□ -1.91
GABPB1-209ENST00000559100 TMPRSS2O15393 492 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 UBOX5O94941 541 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 VIL1P09327 827 aaKnown RBP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 CPEP16870 476 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 RAB6AP20340 208 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 STAT3P40763 770 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 ASPAP45381 313 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 KCNJ6P48051 423 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 NEK4P51957 841 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 PPP2R2AP63151 447 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 SUMO1P63165 101 aaKnown RBP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 TTLL4Q14679 1199 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 PPP2R5DQ14738 602 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 NKG7Q16617 165 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 TM4SF20Q53R12 229 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 FOXB2Q5VYV0 432 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 DCAF15Q66K64 600 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 NSMFQ6X4W1 530 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 PPFIBP1Q86W92 1011 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms