RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 GOLGA8BA8MQT2 603 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 C19orf81C9J6K1 198 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 CXCL11O14625 94 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 IRF6O14896 467 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 SLC10A3P09131 477 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 LIFRP42702 1097 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 HMGCS2P54868 508 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 BACE1P56817 501 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 MKRN3Q13064 507 aaKnown RBP7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 SEC23AQ15436 765 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 CCDC96Q2M329 555 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 SPRYD7Q5W111 196 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 RCSD1Q6JBY9 416 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 USP17L2Q6R6M4 530 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 NOL8Q76FK4 1167 aaKnown RBP7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 PNMA1Q8ND90 353 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 IGDCC4Q8TDY8 1250 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 NUP133Q8WUM0 1156 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 ANKS1AQ92625 1134 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 MKL1Q969V6 931 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 KIAA1683Q9H0B3 1180 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 VCPKMTQ9H867 229 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 GPHNQ9NQX3 736 aaPredicted RBP7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 KCNH4Q9UQ05 1017 aa7.72□□□□□ -1.17
CHRNA3-204ENST00000559002 A0A0G2JLL6 359 aaPredicted RBP7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 A0A1W2PRG0 241 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 RASSF10A6NK89 507 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 GOLGA8AA7E2F4 631 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 F5H6K3 240 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 ZBTB43O43298 467 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 DDAH1O94760 285 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 CALM1P0DP23 149 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 CALM2P0DP24 149 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 CALM3P0DP25 149 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 CETPP11597 493 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 GJA5P36382 358 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 NOVP48745 357 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 GTF2A2P52657 109 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 AK2P54819 239 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 C1QTNF8P60827 252 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 KLRC3Q07444 240 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 APOBRQ0VD83 1088 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 TOB2Q14106 344 aaPredicted RBP7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 DEFB115Q30KQ5 88 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 SLFN13Q68D06 897 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 CYP4F22Q6NT55 531 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 GADL1Q6ZQY3 521 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 PRRT2Q7Z6L0 340 aaPredicted RBP7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 SGMS1Q86VZ5 419 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 MICU3Q86XE3 530 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 SIAH1Q8IUQ4 282 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 ZNF654Q8IZM8 581 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 SPICE1Q8N0Z3 855 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 FBXL16Q8N461 479 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 GMCL1P1Q8NEA9 526 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 CTCFLQ8NI51 663 aaPredicted RBP7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 DCAF4Q8WV16 495 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 LPAR1Q92633 364 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 AGXT2Q9BYV1 514 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 ALDH8A1Q9H2A2 487 aaPredicted RBP7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 SENP2Q9HC62 589 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 GREB1LQ9C091 1923 aaPredicted RBP7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 ATAD5Q96QE3 1844 aa7.71□□□□□ -1.18
CHRNA3-204ENST00000559002 CCL15-CCL14A0A0B4J2E2 113 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 MANSC4A6NHS7 340 aaPredicted RBP7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 WDR46O15213 610 aaKnown RBP7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 NDUFB10O96000 172 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 PARP1P09874 1014 aaKnown RBP7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 BMP3P12645 472 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 HSPA6P17066 643 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 VCAM1P19320 739 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 RXRAP19793 462 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 KIF5BP33176 963 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 SLC1A4P43007 532 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 MCM2P49736 904 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 METAP2P50579 478 aaKnown RBP eCLIP7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 RCAN1P53805 252 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 SREBF2Q12772 1141 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 IKQ13123 557 aaPredicted RBP7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 NOGQ13253 232 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 PABPC4Q13310 644 aaKnown RBP eCLIP7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 DGKZQ13574 1117 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 CCL15Q16663 113 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 SH3D19Q5HYK7 790 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 APOA5Q6Q788 366 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 FASTKD5Q7L8L6 764 aaKnown RBP7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 RAB11FIP4Q86YS3 637 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 CCDC144CPQ8IYA2 1237 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 PROCA1Q8NCQ7 364 aaPredicted RBP7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 CHMP4CQ96CF2 233 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 GMCL1Q96IK5 515 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 CAPNS2Q96L46 248 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 C12orf42Q96LP6 360 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 MYL10Q9BUA6 226 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 TANGO6Q9C0B7 1094 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 TSHZ2Q9NRE2 1034 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 EMILIN3Q9NT22 766 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 BRPF3Q9ULD4 1205 aa7.7□□□□□ -1.18
CHRNA3-204ENST00000559002 CCDC196A0A1B0GTZ2 297 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 TMEM232C9JQI7 657 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms