RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 FAM9AQ8IZU1 332 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-212ENST00000558911 HIRIP3Q9BW71 556 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-212ENST00000558911 CYP8B1Q9UNU6 501 aa4.81□□□□□ -1.64
LRRC28-212ENST00000558911 LTBP4Q8N2S1 1624 aa4.81□□□□□ -1.64
LRRC28-212ENST00000558911 ADGRL1O94910 1474 aa4.81□□□□□ -1.64
LRRC28-212ENST00000558911 MYOCOSA0A1B0GUC4 107 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 RECKO95980 971 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 SYN1P17600 705 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 KIR3DL1P43629 444 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 MAPK8P45983 427 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 EGR3Q06889 387 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 NFIXQ14938 502 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 SF3A1Q15459 793 aaKnown RBP4.8□□□□□ -1.64
LRRC28-212ENST00000558911 TIGD5Q53EQ6 642 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 TCERG1LQ5VWI1 586 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 ZNF662Q6ZS27 426 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 CERS3Q8IU89 383 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 BAHD1Q8TBE0 780 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-212ENST00000558911 SLC6A17Q9H1V8 727 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 DUSP13Q9UII6 198 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 KCTD3Q9Y597 815 aa4.8□□□□□ -1.64
LRRC28-212ENST00000558911 CST3P01034 146 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-212ENST00000558911 ERCC5P28715 1186 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-212ENST00000558911 LTKP29376 864 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 TSNAXIP1Q2TAA8 658 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 ZNF385BQ569K4 471 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 DPH6Q7L8W6 267 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 SIRT2Q8IXJ6 389 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 OXR1Q8N573 874 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 SYTL4Q96C24 671 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-212ENST00000558911 SETDB2Q96T68 719 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 OSBPL7Q9BZF2 842 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 GPR160Q9UJ42 338 aa4.79□□□□□ -1.64
LRRC28-212ENST00000558911 PGRP06401 933 aa4.78□□□□□ -1.64
LRRC28-212ENST00000558911 LMNB1P20700 586 aa4.78□□□□□ -1.64
LRRC28-212ENST00000558911 ENOX2Q16206 610 aaKnown RBP4.78□□□□□ -1.64
LRRC28-212ENST00000558911 C9orf131Q5VYM1 1079 aa4.78□□□□□ -1.64
LRRC28-212ENST00000558911 FBXO33Q7Z6M2 555 aa4.78□□□□□ -1.64
LRRC28-212ENST00000558911 ZDHHC14Q8IZN3 488 aa4.78□□□□□ -1.64
LRRC28-212ENST00000558911 MARCH10Q8NA82 808 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-212ENST00000558911 PDZD8Q8NEN9 1154 aa4.78□□□□□ -1.64
LRRC28-212ENST00000558911 INTS4Q96HW7 963 aaKnown RBP4.78□□□□□ -1.64
LRRC28-212ENST00000558911 Q96M66 194 aa4.78□□□□□ -1.64
LRRC28-212ENST00000558911 KCNC2Q96PR1 638 aa4.78□□□□□ -1.64
LRRC28-212ENST00000558911 TRIT1Q9H3H1 467 aaKnown RBP4.78□□□□□ -1.64
LRRC28-212ENST00000558911 TTF2Q9UNY4 1162 aaKnown RBP4.78□□□□□ -1.64
LRRC28-212ENST00000558911 RFXAPO00287 272 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 TRIM13O60858 407 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 ZGLP1P0C6A0 271 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 MAPK1P28482 360 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 SSPNQ14714 243 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 VMACQ2NL98 169 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 DBX2Q6ZNG2 339 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 PRRT2Q7Z6L0 340 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-212ENST00000558911 IRF2BP1Q8IU81 584 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 PIWIL2Q8TC59 973 aaKnown RBP4.77□□□□□ -1.65
LRRC28-212ENST00000558911 PANK1Q8TE04 598 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 GAL3ST3Q96A11 431 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 DUSP15Q9H1R2 295 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-212ENST00000558911 GPATCH2Q9NW75 528 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 PPM1HQ9ULR3 514 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 SNCAIPQ9Y6H5 919 aa4.77□□□□□ -1.65
LRRC28-212ENST00000558911 SEMA7AO75326 666 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 SRFP11831 508 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 PI3P19957 117 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 CAP2P40123 477 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 ETV3P41162 512 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 SEPT6Q14141 434 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 TTBK2Q6IQ55 1244 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 NOL8Q76FK4 1167 aaKnown RBP4.76□□□□□ -1.65
LRRC28-212ENST00000558911 LILRA2Q8N149 483 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 COX4I2Q96KJ9 171 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 BACH2Q9BYV9 841 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 SP110Q9HB58 689 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 TJP2Q9UDY2 1190 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 DCTN4Q9UJW0 460 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 WWC3Q9ULE0 1092 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 PCDHB5Q9Y5E4 795 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 PCDHA11Q9Y5I1 949 aa4.76□□□□□ -1.65
LRRC28-212ENST00000558911 TEX51A0A1B0GUA7 166 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 FITM1A5D6W6 292 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 OTOL1A6NHN0 477 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-212ENST00000558911 MARCH6O60337 910 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 PSPNO60542 156 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 SASH1O94885 1247 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 USP17L7P0C7H9 530 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 YY1P25490 414 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 DSC3Q14574 896 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 ADGRF1Q5T601 910 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 SCARA3Q6AZY7 606 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 FEZF2Q8TBJ5 459 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 DHX38Q92620 1227 aaKnown RBP4.75□□□□□ -1.65
LRRC28-212ENST00000558911 DNAJC2Q99543 621 aaKnown RBP4.75□□□□□ -1.65
LRRC28-212ENST00000558911 KRTAP17-1Q9BYP8 105 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 SRCIN1Q9C0H9 1055 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 GCM1Q9NP62 436 aa4.75□□□□□ -1.65
LRRC28-212ENST00000558911 YBX2Q9Y2T7 364 aaKnown RBP4.75□□□□□ -1.65
LRRC28-212ENST00000558911 KMT2BQ9UMN6 2715 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-212ENST00000558911 TREHO43280 583 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 PEX10O60683 326 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms