RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 UBE2Q1Q7Z7E8 422 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.95□□□□□ -1.3
LRRC28-208ENST00000558771 IRF7Q92985 503 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 TDRD3Q9H7E2 651 aaKnown RBP6.95□□□□□ -1.3
LRRC28-208ENST00000558771 ARHGEF10LQ9HCE6 1279 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 IFT57Q9NWB7 429 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 ADAMTS8Q9UP79 889 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 UNC80Q8N2C7 3258 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 ARAP2Q8WZ64 1704 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 TCP10L2B9ZVM9 353 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 SOX1O00570 391 aaPredicted RBP6.94□□□□□ -1.3
LRRC28-208ENST00000558771 WDHD1O75717 1129 aaPredicted RBP6.94□□□□□ -1.3
LRRC28-208ENST00000558771 SKIP12755 728 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 CTGFP29279 349 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 WDR43Q15061 677 aaKnown RBP eCLIP6.94□□□□□ -1.3
LRRC28-208ENST00000558771 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 ADAMTS19Q8TE59 1207 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 XAGE2Q96GT9 111 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 HTATIP2Q9BUP3 242 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 GRIP2Q9C0E4 1043 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 TMEM39BQ9GZU3 492 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 RAB6BQ9NRW1 208 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 TTF2Q9UNY4 1162 aaKnown RBP6.94□□□□□ -1.3
LRRC28-208ENST00000558771 CSADQ9Y600 493 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 SNCAIPQ9Y6H5 919 aa6.94□□□□□ -1.3
LRRC28-208ENST00000558771 ANKRD18BA2A2Z9 1011 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 A6NJR5 290 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 ZBTB7BO15156 539 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-208ENST00000558771 GJB1P08034 283 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 CETPP11597 493 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 CCL5P13501 91 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 GRK4P32298 578 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 PSMC4P43686 418 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 GJA8P48165 433 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 TNNI2P48788 182 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 GCKRQ14397 625 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 MFSD14BQ5SR56 506 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 C17orf99Q6UX52 265 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 G2E3Q7L622 706 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 ERO1BQ86YB8 467 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 DZIP1LQ8IYY4 767 aaKnown RBP6.93□□□□□ -1.3
LRRC28-208ENST00000558771 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 CHMP4AQ9BY43 222 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 ZCCHC17Q9NP64 241 aaKnown RBP6.93□□□□□ -1.3
LRRC28-208ENST00000558771 SRRDQ9UH36 339 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 SERPINA10Q9UK55 444 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 RIPOR2Q9Y4F9 1068 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 NR2E3Q9Y5X4 410 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 FAM205AQ6ZU69 1335 aa6.93□□□□□ -1.3
LRRC28-208ENST00000558771 MYBBP1AQ9BQG0 1328 aaKnown RBP6.93□□□□□ -1.3
LRRC28-208ENST00000558771 APAF1O14727 1248 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 WIPF1O43516 503 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 PLIN1O60240 522 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 IL2RAP01589 272 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 RHOQP17081 205 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 CRKP46108 304 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 CENPCQ03188 943 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 CALD1Q05682 793 aaKnown RBP6.92□□□□□ -1.3
LRRC28-208ENST00000558771 SNAPC2Q13487 334 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 TDRD7Q8NHU6 1098 aaKnown RBP6.92□□□□□ -1.3
LRRC28-208ENST00000558771 RAET1EQ8TD07 263 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 ZKSCAN4Q969J2 545 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-208ENST00000558771 WRNIP1Q96S55 665 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 STK31Q9BXU1 1019 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 RNF208Q9H0X6 261 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 CPA4Q9UI42 421 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 GTF3C3Q9Y5Q9 886 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 MYPNQ86TC9 1320 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 ADGRA2Q96PE1 1338 aa6.92□□□□□ -1.3
LRRC28-208ENST00000558771 A0A1W2PPC1 479 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 LZTS3O60299 673 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-208ENST00000558771 FARP2O94887 1054 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-208ENST00000558771 HOXD10P28358 340 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 GMPRP36959 345 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 CACNB3P54284 484 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 UBXN2AP68543 259 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 FOXO4P98177 505 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 POU4F2Q12837 409 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 IFIT5Q13325 482 aaKnown RBP6.91□□□□□ -1.3
LRRC28-208ENST00000558771 PPIL2Q13356 520 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 GRIK5Q16478 980 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 U2AF1L4Q8WU68 220 aaKnown RBP6.91□□□□□ -1.3
LRRC28-208ENST00000558771 ZNF594Q96JF6 807 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-208ENST00000558771 MYH16Q9H6N6 1097 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 ETNK1Q9HBU6 452 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 BIN2Q9UBW5 565 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-208ENST00000558771 STAP2Q9UGK3 403 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 CHMP3Q9Y3E7 222 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 HRH3Q9Y5N1 445 aa6.91□□□□□ -1.3
LRRC28-208ENST00000558771 PDHXO00330 501 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 SGPL1O95470 568 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 STAU1O95793 577 aaKnown RBP6.9□□□□□ -1.3
LRRC28-208ENST00000558771 VSIG8P0DPA2 414 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 HIBADHP31937 336 aaKnown RBP6.9□□□□□ -1.3
LRRC28-208ENST00000558771 INPP5BP32019 993 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 GYG1P46976 350 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 PRKCZQ05513 592 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 PPATQ06203 517 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 UBE4AQ14139 1066 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms