RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TRIM75PA6NK02 468 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 ADALQ6DHV7 355 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 RCSD1Q6JBY9 416 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 LAMB2P55268 1798 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 VWA3AA6NCI4 1184 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 YEATS4O95619 227 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 POLD1P28340 1107 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 GRIN1Q05586 938 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 SHROOM1Q2M3G4 852 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 UBR3Q6ZT12 1888 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 STAMQ92783 540 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 POLR3EQ9NVU0 708 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 KCTD1Q719H9 257 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 PLIN2Q99541 437 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 GJA3Q9Y6H8 435 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 AFMP43652 599 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 SLC39A14Q15043 492 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 CFAP100Q494V2 611 aa12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 EARS2Q5JPH6 523 aaKnown RBP12.39□□□□□ -0.43
CSPG4P5-201ENST00000558731 CDC25AP30304 524 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 RILPL1Q5EBL4 403 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 C15orf52Q6ZUT6 534 aaKnown RBP12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 KRI1Q8N9T8 703 aaKnown RBP12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 DHX58Q96C10 678 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 MARCH6O60337 910 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 STYK1Q6J9G0 422 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 SPICE1Q8N0Z3 855 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 FAM200AQ8TCP9 573 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 CBX8Q9HC52 389 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 POLR2DO15514 142 aaKnown RBP12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 PRPF3O43395 683 aaKnown RBP12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 JAKMIP3Q5VZ66 844 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 PIGSQ96S52 555 aa12.38□□□□□ -0.43
CSPG4P5-201ENST00000558731 UQCRHLA0A096LP55 91 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 UQCRHP07919 91 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 SNAP25P60880 206 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 PNOCQ13519 176 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 DHX8Q14562 1220 aaKnown RBP12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 PKN1Q16512 942 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 MIGA2Q7L4E1 593 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 GRAMD1CQ8IYS0 662 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 CACNA1SQ13698 1873 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 APOBEC3HQ6NTF7 200 aaKnown RBP12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 C11orf57Q6ZUT1 292 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 C16orf86Q6ZW13 317 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 NIM1KQ8IY84 436 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 COA7Q96BR5 231 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 OSBPL5Q9H0X9 879 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 DDTLA6NHG4 134 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 GNAQP50148 359 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 DLGAP5Q15398 846 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 INF2Q27J81 1249 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 TTC38Q5R3I4 469 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 STRIP1Q5VSL9 837 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 AOPEPQ8N6M6 819 aa12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P5-201ENST00000558731 LETM2Q2VYF4 491 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 USP49Q70CQ1 688 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 CERS3Q8IU89 383 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 CEP57L1Q8IYX8 460 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 CEP131Q9UPN4 1083 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 TOP1P11387 765 aaKnown RBP12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 PPP2R5BQ15173 497 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 STX1AQ16623 288 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 CERKLQ49MI3 558 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 FOXP1Q9H334 677 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 ZHX1Q9UKY1 873 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 PSMD14O00487 310 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 TOB1P50616 345 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 DACT2Q5SW24 774 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 KLHL10Q6JEL2 608 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 NEDD1Q8NHV4 660 aa12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 TTC12Q9H892 705 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 BIN2Q9UBW5 565 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P5-201ENST00000558731 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 TTBK2Q6IQ55 1244 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 SUPT20HQ8NEM7 779 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 FBXO41Q8TF61 875 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 NUP88Q99567 741 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 CSRNP2Q9H175 543 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 GAKO14976 1311 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 FOXN1O15353 648 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 PTGDRQ13258 359 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 SNW1Q13573 536 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms