RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 PTH1RQ03431 593 aa16.01■□□□□ 0.15
TMED3-205ENST00000558562 POTEEQ6S8J3 1075 aa16.01■□□□□ 0.15
TMED3-205ENST00000558562 GPR142Q7Z601 462 aa16.01■□□□□ 0.15
TMED3-205ENST00000558562 IL17RAQ96F46 866 aa16.01■□□□□ 0.15
TMED3-205ENST00000558562 LBHD1Q9BQE6 289 aaPredicted RBP16.01■□□□□ 0.15
TMED3-205ENST00000558562 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
TMED3-205ENST00000558562 ANTXR1Q9H6X2 564 aa16.01■□□□□ 0.15
TMED3-205ENST00000558562 HERC5Q9UII4 1024 aaKnown RBP16.01■□□□□ 0.15
TMED3-205ENST00000558562 PRUNE2Q8WUY3 3088 aa16.01■□□□□ 0.15
TMED3-205ENST00000558562 COL2A1P02458 1487 aaPredicted RBP16.01■□□□□ 0.15
TMED3-205ENST00000558562 RNF113AO15541 343 aaKnown RBP16■□□□□ 0.15
TMED3-205ENST00000558562 ST18O60284 1047 aa16■□□□□ 0.15
TMED3-205ENST00000558562 GDF11O95390 407 aa16■□□□□ 0.15
TMED3-205ENST00000558562 LDHCP07864 332 aa16■□□□□ 0.15
TMED3-205ENST00000558562 RGS2P41220 211 aa16■□□□□ 0.15
TMED3-205ENST00000558562 ATN1P54259 1190 aaPredicted RBP16■□□□□ 0.15
TMED3-205ENST00000558562 ERVK-9P63128 1117 aa16■□□□□ 0.15
TMED3-205ENST00000558562 ERVK-24P63145 666 aa16■□□□□ 0.15
TMED3-205ENST00000558562 TTF1Q15361 905 aaPredicted RBP16■□□□□ 0.15
TMED3-205ENST00000558562 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
TMED3-205ENST00000558562 ZMYM1Q5SVZ6 1142 aa16■□□□□ 0.15
TMED3-205ENST00000558562 MORN1Q5T089 497 aa16■□□□□ 0.15
TMED3-205ENST00000558562 FAM109BQ6ICB4 259 aaPredicted RBP16■□□□□ 0.15
TMED3-205ENST00000558562 ZNF589Q86UQ0 364 aaPredicted RBP16■□□□□ 0.15
TMED3-205ENST00000558562 TRMT44Q8IYL2 757 aaKnown RBP16■□□□□ 0.15
TMED3-205ENST00000558562 SPATA5Q8NB90 893 aa16■□□□□ 0.15
TMED3-205ENST00000558562 HELLSQ9NRZ9 838 aa16■□□□□ 0.15
TMED3-205ENST00000558562 PI4KBQ9UBF8 816 aa16■□□□□ 0.15
TMED3-205ENST00000558562 CDH23Q9H251 3354 aa16■□□□□ 0.15
TMED3-205ENST00000558562 SIPA1L1O43166 1804 aa16■□□□□ 0.15
TMED3-205ENST00000558562 ZFYP08048 801 aaPredicted RBP15.99■□□□□ 0.15
TMED3-205ENST00000558562 ASNSP08243 561 aa15.99■□□□□ 0.15
TMED3-205ENST00000558562 PLEKHH3Q7Z736 793 aa15.99■□□□□ 0.15
TMED3-205ENST00000558562 APBA2Q99767 749 aa15.99■□□□□ 0.15
TMED3-205ENST00000558562 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.99■□□□□ 0.15
TMED3-205ENST00000558562 DNAJC18Q9H819 358 aa15.99■□□□□ 0.15
TMED3-205ENST00000558562 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
TMED3-205ENST00000558562 RBM8AQ9Y5S9 174 aaKnown RBP15.99■□□□□ 0.15
TMED3-205ENST00000558562 FRMPD3Q5JV73 1810 aa15.98■□□□□ 0.15
TMED3-205ENST00000558562 USP17L10C9JJH3 530 aa15.98■□□□□ 0.15
TMED3-205ENST00000558562 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
TMED3-205ENST00000558562 CD2BP2O95400 341 aaKnown RBP15.98■□□□□ 0.15
TMED3-205ENST00000558562 CHGBP05060 677 aa15.98■□□□□ 0.15
TMED3-205ENST00000558562 ZNF697Q5TEC3 545 aa15.98■□□□□ 0.15
TMED3-205ENST00000558562 MAPKAPK5Q8IW41 473 aa15.98■□□□□ 0.15
TMED3-205ENST00000558562 MAP4K1Q92918 833 aa15.98■□□□□ 0.15
TMED3-205ENST00000558562 SEC62Q99442 399 aaKnown RBP15.98■□□□□ 0.15
TMED3-205ENST00000558562 FLRT1Q9NZU1 646 aa15.98■□□□□ 0.15
TMED3-205ENST00000558562 SNX14Q9Y5W7 946 aa15.98■□□□□ 0.15
TMED3-205ENST00000558562 C19orf81C9J6K1 198 aa15.97■□□□□ 0.15
TMED3-205ENST00000558562 CNGA1P29973 690 aa15.97■□□□□ 0.15
TMED3-205ENST00000558562 ZSCAN25Q6NSZ9 544 aa15.97■□□□□ 0.15
TMED3-205ENST00000558562 CCDC129Q6ZRS4 1044 aa15.97■□□□□ 0.15
TMED3-205ENST00000558562 CRACR2BQ8N4Y2 399 aaPredicted RBP15.97■□□□□ 0.15
TMED3-205ENST00000558562 TGFBRAP1Q8WUH2 860 aa15.97■□□□□ 0.15
TMED3-205ENST00000558562 CDX2Q99626 313 aaPredicted RBP15.97■□□□□ 0.15
TMED3-205ENST00000558562 EMILIN3Q9NT22 766 aa15.97■□□□□ 0.15
TMED3-205ENST00000558562 AATFQ9NY61 560 aaKnown RBP eCLIP15.97■□□□□ 0.15
TMED3-205ENST00000558562 LRP2BPQ9P2M1 347 aa15.97■□□□□ 0.15
TMED3-205ENST00000558562 MAST2Q6P0Q8 1798 aa15.97■□□□□ 0.15
TMED3-205ENST00000558562 CYP2E1P05181 493 aaPredicted RBP15.96■□□□□ 0.15
TMED3-205ENST00000558562 MAP2K5Q13163 448 aa15.96■□□□□ 0.15
TMED3-205ENST00000558562 ZYXQ15942 572 aaKnown RBP15.96■□□□□ 0.15
TMED3-205ENST00000558562 WDR78Q5VTH9 848 aa15.96■□□□□ 0.15
TMED3-205ENST00000558562 APPBP2Q92624 585 aa15.96■□□□□ 0.15
TMED3-205ENST00000558562 KCNB2Q92953 911 aa15.96■□□□□ 0.15
TMED3-205ENST00000558562 NOL10Q9BSC4 688 aaKnown RBP15.96■□□□□ 0.15
TMED3-205ENST00000558562 TRIM34Q9BYJ4 488 aa15.96■□□□□ 0.15
TMED3-205ENST00000558562 DHX36Q9H2U1 1008 aaKnown RBP15.96■□□□□ 0.15
TMED3-205ENST00000558562 PIH1D3Q9NQM4 214 aaKnown RBP15.96■□□□□ 0.15
TMED3-205ENST00000558562 ZBTB21Q9ULJ3 1066 aa15.96■□□□□ 0.15
TMED3-205ENST00000558562 CNMDO75829 334 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 NEK4P51957 841 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 RTP1P59025 263 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 NECTIN1Q15223 517 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 SHHQ15465 462 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 SLFNL1Q499Z3 407 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 RNF20Q5VTR2 975 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 MFSD14CQ5VZR4 134 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 CREB3L3Q68CJ9 461 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 IL27Q8NEV9 243 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 MAFAQ8NHW3 353 aaPredicted RBP15.95■□□□□ 0.14
TMED3-205ENST00000558562 SLKQ9H2G2 1235 aaPredicted RBP15.95■□□□□ 0.14
TMED3-205ENST00000558562 PRKAG2Q9UGJ0 569 aa15.95■□□□□ 0.14
TMED3-205ENST00000558562 DDX20Q9UHI6 824 aaKnown RBP15.95■□□□□ 0.14
TMED3-205ENST00000558562 SAP30BPQ9UHR5 308 aaKnown RBP15.95■□□□□ 0.14
TMED3-205ENST00000558562 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
TMED3-205ENST00000558562 M0R2C6 588 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 SLC27A2O14975 620 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 IDH1O75874 414 aaKnown RBP15.94■□□□□ 0.14
TMED3-205ENST00000558562 CYP2C19P33261 490 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 ADD2P35612 726 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 C9orf50Q5SZB4 431 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 NAA16Q6N069 864 aaPredicted RBP15.94■□□□□ 0.14
TMED3-205ENST00000558562 ADGRA1Q86SQ6 560 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 SPRYD3Q8NCJ5 442 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 SEMA6BQ9H3T3 888 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 ATP11BQ9Y2G3 1177 aa15.94■□□□□ 0.14
TMED3-205ENST00000558562 LTBP2Q14767 1821 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms