RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 FERMT2Q96AC1 680 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 C12orf42Q96LP6 360 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 GAS2L1Q99501 681 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-207ENST00000558500 C1QTNF1Q9BXJ1 281 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 LTBP2Q14767 1821 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 PTPRCP08575 1304 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 SYNGAP1Q96PV0 1343 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 KIAA0355O15063 1070 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 SEPT4O43236 478 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 RAG1P15918 1043 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 FPGSQ05932 587 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 LRRC41Q15345 812 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 OLFML2BQ68BL8 750 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 CATSPERGQ6ZRH7 1159 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 FOXP4Q8IVH2 680 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-207ENST00000558500 TRIM34Q9BYJ4 488 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 RAI14Q9P0K7 980 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 HMG20BQ9P0W2 317 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 BTBD7Q9P203 1132 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 PHF24Q9UPV7 400 aa8.34□□□□□ -1.07
LRRC28-207ENST00000558500 PA2G4Q9UQ80 394 aaKnown RBP8.34□□□□□ -1.07
LRRC28-207ENST00000558500 ARIH1Q9Y4X5 557 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-207ENST00000558500 A0A1B0GUL7 405 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 ADORA2AP29274 412 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 MVPQ14764 893 aaKnown RBP8.33□□□□□ -1.08
LRRC28-207ENST00000558500 ZYXQ15942 572 aaKnown RBP8.33□□□□□ -1.08
LRRC28-207ENST00000558500 PI16Q6UXB8 463 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 TBC1D9Q6ZT07 1266 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 DPP9Q86TI2 863 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 MAPKAPK5Q8IW41 473 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 CRACR2BQ8N4Y2 399 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-207ENST00000558500 SPATA5Q8NB90 893 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 XAGE2Q96GT9 111 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 PRDM12Q9H4Q4 367 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 COPRSQ9NQ92 184 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 TMEM39AQ9NV64 488 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 CACNA1FO60840 1977 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 DNAH12Q6ZR08 3092 aa8.33□□□□□ -1.08
LRRC28-207ENST00000558500 FLT1P17948 1338 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 SPDYE16A6NNV3 312 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-207ENST00000558500 BAG3O95817 575 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 GH2P01242 217 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 UBTFL1P0CB47 393 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-207ENST00000558500 VCAM1P19320 739 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 USP14P54578 494 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 ADGRE1Q14246 886 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-207ENST00000558500 FAM47AQ5JRC9 791 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 PRAMEF19Q5SWL8 479 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 TGFBRAP1Q8WUH2 860 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 FEZ1Q99689 392 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.32□□□□□ -1.08
LRRC28-207ENST00000558500 NOL10Q9BSC4 688 aaKnown RBP8.32□□□□□ -1.08
LRRC28-207ENST00000558500 MOV10L1Q9BXT6 1211 aaKnown RBP8.32□□□□□ -1.08
LRRC28-207ENST00000558500 PBX4Q9BYU1 374 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 PALD1Q9ULE6 856 aa8.32□□□□□ -1.08
LRRC28-207ENST00000558500 STRNO43815 780 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 PQBP1O60828 265 aaKnown RBP8.31□□□□□ -1.08
LRRC28-207ENST00000558500 COBLO75128 1261 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 SEC24BO95487 1268 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 PLCG2P16885 1265 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 PBX2P40425 430 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 PPP4CP60510 307 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 TFCP2Q12800 502 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 RASIP1Q5U651 963 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 ANKRD33Q7Z3H0 272 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 TOX2Q96NM4 488 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-207ENST00000558500 KIAA1683Q9H0B3 1180 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 XPNPEP3Q9NQH7 507 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 AATFQ9NY61 560 aaKnown RBP eCLIP8.31□□□□□ -1.08
LRRC28-207ENST00000558500 SLC5A4Q9NY91 659 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 CXXC1Q9P0U4 656 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-207ENST00000558500 LRP2BPQ9P2M1 347 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 AKAP2Q9Y2D5 859 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 MYH2Q9UKX2 1941 aa8.31□□□□□ -1.08
LRRC28-207ENST00000558500 A0A1W2PQ45 241 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-207ENST00000558500 A0A1W2PQY0 241 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 GRXCR1A8MXD5 290 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 DCDC2CA8MYV0 355 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 TIMP1P01033 207 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 HLA-DOAP06340 250 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 RARBP10826 455 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 BMP1P13497 986 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 ERCC3P19447 782 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 IGFBP4P22692 258 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-207ENST00000558500 FAAP100Q0VG06 881 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 TMEM240Q5SV17 173 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 TATDN1Q6P1N9 297 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 ATF7IPQ6VMQ6 1270 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 CCDC129Q6ZRS4 1044 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 RNF180Q86T96 592 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 SLC44A5Q8NCS7 719 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 SHCBP1Q8NEM2 672 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 ACER1Q8TDN7 264 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 SSH1Q8WYL5 1049 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 NEUROD6Q96NK8 337 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms