RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 USP17L15C9J2P7 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 USP17L13C9JLJ4 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 USP17L11C9JVI0 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 USP17L18D6R9N7 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 USP17L22D6RA61 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 USP17L17D6RBQ6 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 USP17L19D6RCP7 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 USP17L20D6RJB6 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 TTLL1O95922 423 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 SP3Q02447 781 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 USP17L24Q0WX57 530 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 COL13A1Q5TAT6 717 aaPredicted RBP14.77□□□□□ -0.05
LRRC28-206ENST00000558471 CATSPERGQ6ZRH7 1159 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 P2RX7Q99572 595 aaKnown RBP14.77□□□□□ -0.05
LRRC28-206ENST00000558471 RPAP3Q9H6T3 665 aaPredicted RBP14.77□□□□□ -0.05
LRRC28-206ENST00000558471 TAF6LQ9Y6J9 622 aa14.77□□□□□ -0.05
LRRC28-206ENST00000558471 B4E1Z4 1266 aa14.76□□□□□ -0.05
LRRC28-206ENST00000558471 BCRP11274 1271 aa14.76□□□□□ -0.05
LRRC28-206ENST00000558471 NOVP48745 357 aa14.76□□□□□ -0.05
LRRC28-206ENST00000558471 IRX3P78415 501 aaPredicted RBP14.76□□□□□ -0.05
LRRC28-206ENST00000558471 SMCR8Q8TEV9 937 aaPredicted RBP14.76□□□□□ -0.05
LRRC28-206ENST00000558471 LPAR1Q92633 364 aa14.76□□□□□ -0.05
LRRC28-206ENST00000558471 ESR2Q92731 530 aa14.76□□□□□ -0.05
LRRC28-206ENST00000558471 GOPCQ9HD26 462 aa14.76□□□□□ -0.05
LRRC28-206ENST00000558471 TCP11L1Q9NUJ3 509 aa14.76□□□□□ -0.05
LRRC28-206ENST00000558471 RLFQ13129 1914 aa14.76□□□□□ -0.05
LRRC28-206ENST00000558471 F5H6K3 240 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 RAD21O60216 631 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 KDM4AO75164 1064 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 CAP1Q01518 475 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 KLRC3Q07444 240 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 NECTIN1Q15223 517 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 POTEEQ6S8J3 1075 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 LRRC47Q8N1G4 583 aaKnown RBP14.75□□□□□ -0.05
LRRC28-206ENST00000558471 ZKSCAN3Q9BRR0 538 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 KRT23Q9C075 422 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 ZSWIM5Q9P217 1185 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 STX8Q9UNK0 236 aa14.75□□□□□ -0.05
LRRC28-206ENST00000558471 ZSWIM8A7E2V4 1837 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 PARP14Q460N5 1801 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 E7EWF7 191 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 WDR46O15213 610 aaKnown RBP14.74□□□□□ -0.05
LRRC28-206ENST00000558471 NDUFB10O96000 172 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 GCLCP48506 637 aaPredicted RBP14.74□□□□□ -0.05
LRRC28-206ENST00000558471 HERVK_113P62684 666 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 PPP4R3BQ5MIZ7 849 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 STOX1Q6ZVD7 989 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 ANKRD13CQ8N6S4 541 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 CD99L2Q8TCZ2 262 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 CNNM2Q9H8M5 875 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 SYNPO2Q9UMS6 1093 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 MGAMO43451 1857 aa14.74□□□□□ -0.05
LRRC28-206ENST00000558471 SLC27A2O14975 620 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 PEX10O60683 326 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-206ENST00000558471 NT5C2P49902 561 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 COG2Q14746 738 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 FAM83BQ5T0W9 1011 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 CREB3L3Q68CJ9 461 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 RCSD1Q6JBY9 416 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 ERO1AQ96HE7 468 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 TTC14Q96N46 770 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 NUP88Q99567 741 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-206ENST00000558471 TMEM47Q9BQJ4 181 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 TANGO6Q9C0B7 1094 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 RBPJLQ9UBG7 517 aa14.73□□□□□ -0.05
LRRC28-206ENST00000558471 DOCK3Q8IZD9 2030 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 CTGFP29279 349 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 LACTBP83111 547 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-206ENST00000558471 TRDNQ13061 729 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 SLFN13Q68D06 897 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 CYB5R4Q7L1T6 521 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 IQCA1Q86XH1 822 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 GMCL1P1Q8NEA9 526 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 NCOA7Q8NI08 942 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 CHMP4CQ96CF2 233 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 ARHGAP39Q9C0H5 1083 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 TXNRD2Q9NNW7 524 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 HOXC10Q9NYD6 342 aa14.72□□□□□ -0.05
LRRC28-206ENST00000558471 SPDYE16A6NNV3 312 aaPredicted RBP14.71□□□□□ -0.05
LRRC28-206ENST00000558471 FLOT1O75955 427 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 TOP1P11387 765 aaKnown RBP14.71□□□□□ -0.05
LRRC28-206ENST00000558471 DSG3P32926 999 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 FAM110CQ1W6H9 321 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 Q3C1V9 767 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 LBX2Q6XYB7 198 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 CTU1Q7Z7A3 348 aaKnown RBP14.71□□□□□ -0.05
LRRC28-206ENST00000558471 DGKHQ86XP1 1220 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 ANKS1AQ92625 1134 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 ZSCAN10Q96SZ4 725 aaPredicted RBP14.71□□□□□ -0.05
LRRC28-206ENST00000558471 FBXO28Q9NVF7 368 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 MORF4L1Q9UBU8 362 aa14.71□□□□□ -0.05
LRRC28-206ENST00000558471 COL11A1P12107 1806 aaPredicted RBP14.71□□□□□ -0.06
LRRC28-206ENST00000558471 CNMDO75829 334 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 REC8O95072 547 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 MCCP23508 829 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 PSMC4P43686 418 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 KIF22Q14807 665 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 CCDC178Q5BJE1 867 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms