RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ARHGEF10LQ9HCE6 1279 aa18.7■□□□□ 0.58
TPM1-211ENST00000558314 DDX60LQ5H9U9 1706 aaKnown RBP18.69■□□□□ 0.58
TPM1-211ENST00000558314 CNGA1P29973 690 aa18.69■□□□□ 0.58
TPM1-211ENST00000558314 CDK8P49336 464 aa18.69■□□□□ 0.58
TPM1-211ENST00000558314 GPATCH3Q96I76 525 aa18.69■□□□□ 0.58
TPM1-211ENST00000558314 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
TPM1-211ENST00000558314 PUS7LQ9H0K6 701 aaKnown RBP18.69■□□□□ 0.58
TPM1-211ENST00000558314 C11orf49Q9H6J7 331 aa18.69■□□□□ 0.58
TPM1-211ENST00000558314 ECHDC1Q9NTX5 307 aa18.69■□□□□ 0.58
TPM1-211ENST00000558314 ZMYND8Q9ULU4 1186 aaPredicted RBP18.69■□□□□ 0.58
TPM1-211ENST00000558314 TRIOBPQ9H2D6 2365 aa18.69■□□□□ 0.58
TPM1-211ENST00000558314 CAPN2P17655 700 aa18.68■□□□□ 0.58
TPM1-211ENST00000558314 COG2Q14746 738 aa18.68■□□□□ 0.58
TPM1-211ENST00000558314 UBE3CQ15386 1083 aa18.68■□□□□ 0.58
TPM1-211ENST00000558314 MFSD14CQ5VZR4 134 aa18.68■□□□□ 0.58
TPM1-211ENST00000558314 ANKLE1Q8NAG6 615 aa18.68■□□□□ 0.58
TPM1-211ENST00000558314 USP6NLQ92738 828 aa18.68■□□□□ 0.58
TPM1-211ENST00000558314 STAP2Q9UGK3 403 aa18.68■□□□□ 0.58
TPM1-211ENST00000558314 SLC15A5A6NIM6 579 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 FLOT1O75955 427 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 SYN1P17600 705 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 PTPREP23469 700 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 KIAA1755Q5JYT7 1200 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 MAP3K21Q5TCX8 1036 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 C12orf60Q5U649 245 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 SH2D4AQ9H788 454 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 HOXC10Q9NYD6 342 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 FLRT1Q9NZU1 646 aa18.67■□□□□ 0.58
TPM1-211ENST00000558314 DPP9Q86TI2 863 aa18.66■□□□□ 0.58
TPM1-211ENST00000558314 MOV10L1Q9BXT6 1211 aaKnown RBP18.66■□□□□ 0.58
TPM1-211ENST00000558314 OGDHLQ9ULD0 1010 aa18.66■□□□□ 0.58
TPM1-211ENST00000558314 BAZ2AQ9UIF9 1905 aaKnown RBP18.66■□□□□ 0.58
TPM1-211ENST00000558314 MINDY4BA8MYZ0 360 aa18.65■□□□□ 0.58
TPM1-211ENST00000558314 CYP2C19P33261 490 aa18.65■□□□□ 0.58
TPM1-211ENST00000558314 CTR9Q6PD62 1173 aa18.65■□□□□ 0.58
TPM1-211ENST00000558314 C16orf86Q6ZW13 317 aa18.65■□□□□ 0.58
TPM1-211ENST00000558314 NCAPG2Q86XI2 1143 aa18.65■□□□□ 0.58
TPM1-211ENST00000558314 NPLOC4Q8TAT6 608 aa18.65■□□□□ 0.58
TPM1-211ENST00000558314 ATG4CQ96DT6 458 aa18.65■□□□□ 0.58
TPM1-211ENST00000558314 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
TPM1-211ENST00000558314 APPP05067 770 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 EEF2P13639 858 aaKnown RBP18.64■□□□□ 0.57
TPM1-211ENST00000558314 ERCC3P19447 782 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 DSG3P32926 999 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 LBX2Q6XYB7 198 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 CCDC17Q96LX7 622 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 SPATC1LQ9H0A9 340 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 DCTPP1Q9H773 170 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 VCPKMTQ9H867 229 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 TMX2Q9Y320 296 aa18.64■□□□□ 0.57
TPM1-211ENST00000558314 ADORA2AP29274 412 aa18.63■□□□□ 0.57
TPM1-211ENST00000558314 MNX1P50219 401 aaPredicted RBP18.63■□□□□ 0.57
TPM1-211ENST00000558314 GRB14Q14449 540 aa18.63■□□□□ 0.57
TPM1-211ENST00000558314 SIAH1Q8IUQ4 282 aa18.63■□□□□ 0.57
TPM1-211ENST00000558314 LPAR1Q92633 364 aa18.63■□□□□ 0.57
TPM1-211ENST00000558314 MKNK2Q9HBH9 465 aa18.63■□□□□ 0.57
TPM1-211ENST00000558314 ARPP21Q9UBL0 812 aaPredicted RBP18.63■□□□□ 0.57
TPM1-211ENST00000558314 MYH8P13535 1937 aa18.62■□□□□ 0.57
TPM1-211ENST00000558314 RNF113AO15541 343 aaKnown RBP18.62■□□□□ 0.57
TPM1-211ENST00000558314 TDO2P48775 406 aa18.62■□□□□ 0.57
TPM1-211ENST00000558314 KBTBD3Q8NAB2 608 aa18.62■□□□□ 0.57
TPM1-211ENST00000558314 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
TPM1-211ENST00000558314 PFASO15067 1338 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 SLC4A3P48751 1232 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 FAM83BQ5T0W9 1011 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 ANO1Q5XXA6 986 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 LHX8Q68G74 356 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 APPBP2Q92624 585 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 OSBP2Q969R2 916 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 KANSL2Q9H9L4 492 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 GOPCQ9HD26 462 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 MYH7P12883 1935 aa18.61■□□□□ 0.57
TPM1-211ENST00000558314 WDR46O15213 610 aaKnown RBP18.6■□□□□ 0.57
TPM1-211ENST00000558314 GPAA1O43292 621 aa18.6■□□□□ 0.57
TPM1-211ENST00000558314 MB21D1Q8N884 522 aa18.6■□□□□ 0.57
TPM1-211ENST00000558314 SENP6Q9GZR1 1112 aaPredicted RBP18.6■□□□□ 0.57
TPM1-211ENST00000558314 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
TPM1-211ENST00000558314 DDX20Q9UHI6 824 aaKnown RBP18.6■□□□□ 0.57
TPM1-211ENST00000558314 PCDHB15Q9Y5E8 787 aa18.6■□□□□ 0.57
TPM1-211ENST00000558314 ALPK3Q96L96 1907 aa18.59■□□□□ 0.57
TPM1-211ENST00000558314 GSG1L2A8MUP6 293 aa18.59■□□□□ 0.57
TPM1-211ENST00000558314 M0R2C6 588 aa18.59■□□□□ 0.57
TPM1-211ENST00000558314 PRDM1O75626 825 aa18.59■□□□□ 0.57
TPM1-211ENST00000558314 ATN1P54259 1190 aaPredicted RBP18.59■□□□□ 0.57
TPM1-211ENST00000558314 OTUD7AQ8TE49 926 aaPredicted RBP18.59■□□□□ 0.57
TPM1-211ENST00000558314 NUP88Q99567 741 aaPredicted RBP18.59■□□□□ 0.57
TPM1-211ENST00000558314 FSD1Q9BTV5 496 aa18.59■□□□□ 0.57
TPM1-211ENST00000558314 SLC5A4Q9NY91 659 aa18.59■□□□□ 0.57
TPM1-211ENST00000558314 ISY1Q9ULR0 285 aaKnown RBP18.59■□□□□ 0.57
TPM1-211ENST00000558314 STRNO43815 780 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 COBLO75128 1261 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 HOXC6P09630 235 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 TMEM132BQ14DG7 1078 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 PRAMEF19Q5SWL8 479 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 SHCBP1Q8NEM2 672 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 TRPV1Q8NER1 839 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 PRO3102Q9H379 93 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 MROH8Q9H579 483 aa18.58■□□□□ 0.56
TPM1-211ENST00000558314 ERC2O15083 957 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms