RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 FAM217BQ9NTX9 383 aaPredicted RBP13.48□□□□□ -0.25
RORA-207ENST00000558234 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
RORA-207ENST00000558234 IRF6O14896 467 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
RORA-207ENST00000558234 PDIA3P30101 505 aaKnown RBP13.48□□□□□ -0.25
RORA-207ENST00000558234 RCAN1P53805 252 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 CLEC10AQ8IUN9 316 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 ZNF287Q9HBT7 754 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 ADAMTS5Q9UNA0 930 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 KDM4AO75164 1064 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 SLC3A2P08195 630 aaKnown RBP13.47□□□□□ -0.25
RORA-207ENST00000558234 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 ESR2Q92731 530 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
RORA-207ENST00000558234 GPHNQ9NQX3 736 aaPredicted RBP13.47□□□□□ -0.25
RORA-207ENST00000558234 SLC45A1Q9Y2W3 748 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 C1QTNF8P60827 252 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 PLA2G6O60733 806 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 TROAPQ12815 778 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 ZSCAN29Q8IWY8 852 aaPredicted RBP13.47□□□□□ -0.25
RORA-207ENST00000558234 AMOTL1Q8IY63 956 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 GMCL1Q96IK5 515 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 TNKSO95271 1327 aa13.47□□□□□ -0.25
RORA-207ENST00000558234 ACER1Q8TDN7 264 aa13.46□□□□□ -0.25
RORA-207ENST00000558234 USP17L5A8MUK1 530 aa13.46□□□□□ -0.25
RORA-207ENST00000558234 CXCL11O14625 94 aa13.46□□□□□ -0.25
RORA-207ENST00000558234 EEF2P13639 858 aaKnown RBP13.46□□□□□ -0.25
RORA-207ENST00000558234 ECE1P42892 770 aa13.46□□□□□ -0.25
RORA-207ENST00000558234 C2orf69Q8N8R5 385 aa13.46□□□□□ -0.25
RORA-207ENST00000558234 OPTNQ96CV9 577 aa13.46□□□□□ -0.25
RORA-207ENST00000558234 SMCHD1A6NHR9 2005 aa13.46□□□□□ -0.25
RORA-207ENST00000558234 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.26
RORA-207ENST00000558234 FUT2Q10981 343 aa13.46□□□□□ -0.26
RORA-207ENST00000558234 NTRK3Q16288 839 aa13.46□□□□□ -0.26
RORA-207ENST00000558234 RGMBQ6NW40 437 aa13.46□□□□□ -0.26
RORA-207ENST00000558234 LBX2Q6XYB7 198 aa13.46□□□□□ -0.26
RORA-207ENST00000558234 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.26
RORA-207ENST00000558234 LLPHQ9BRT6 129 aaKnown RBP13.46□□□□□ -0.26
RORA-207ENST00000558234 PLXNA1Q9UIW2 1896 aa13.46□□□□□ -0.26
RORA-207ENST00000558234 TTLL1O95922 423 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 NF2P35240 595 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 NSUN7Q8NE18 718 aaKnown RBP13.45□□□□□ -0.26
RORA-207ENST00000558234 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 PTPN18Q99952 460 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 ZCCHC17Q9NP64 241 aaKnown RBP13.45□□□□□ -0.26
RORA-207ENST00000558234 TM4SF4P48230 202 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 BACE1P56817 501 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 BTNL9Q6UXG8 535 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 CRACR2BQ8N4Y2 399 aaPredicted RBP13.45□□□□□ -0.26
RORA-207ENST00000558234 PCNTO95613 3336 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 CEP350Q5VT06 3117 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 MCM5P33992 734 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 PROCA1Q8NCQ7 364 aaPredicted RBP13.45□□□□□ -0.26
RORA-207ENST00000558234 ZNF280CQ8ND82 737 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 PRC1O43663 620 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 HOXA7P31268 230 aaPredicted RBP13.45□□□□□ -0.26
RORA-207ENST00000558234 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
RORA-207ENST00000558234 CASP8AP2Q9UKL3 1982 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 CCDC84Q86UT8 332 aaPredicted RBP13.44□□□□□ -0.26
RORA-207ENST00000558234 REPS2Q8NFH8 660 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 HSPA6P17066 643 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 NUCB2P80303 420 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 CCDC178Q5BJE1 867 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 RASGRP2Q7LDG7 609 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 BRF1Q92994 677 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 MTMR6Q9Y217 621 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 MCM4P33991 863 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 APOBRQ0VD83 1088 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 DGKZQ13574 1117 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 MKNK2Q9HBH9 465 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
RORA-207ENST00000558234 PALM3A6NDB9 673 aaPredicted RBP13.43□□□□□ -0.26
RORA-207ENST00000558234 TSPY3P0CV98 308 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 TSPY8P0CW00 308 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 SYT1P21579 422 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 BRI3BPQ8WY22 251 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 LRRC2Q9BYS8 371 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 VCPKMTQ9H867 229 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 C19orf81C9J6K1 198 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 PDHBP11177 359 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 TOP1P11387 765 aaKnown RBP13.43□□□□□ -0.26
RORA-207ENST00000558234 ICA1Q05084 483 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.43□□□□□ -0.26
RORA-207ENST00000558234 CHST3Q7LGC8 479 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 NBPF11Q86T75 865 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 TMEM87AQ8NBN3 555 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 PPP4R3BQ5MIZ7 849 aa13.43□□□□□ -0.26
RORA-207ENST00000558234 ZNFX1Q9P2E3 1918 aaKnown RBP13.43□□□□□ -0.26
RORA-207ENST00000558234 GRM4Q14833 912 aa13.42□□□□□ -0.26
RORA-207ENST00000558234 ZNF444Q8N0Y2 327 aaPredicted RBP13.42□□□□□ -0.26
RORA-207ENST00000558234 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.42□□□□□ -0.26
RORA-207ENST00000558234 HTTP42858 3142 aa13.42□□□□□ -0.26
RORA-207ENST00000558234 DDAH1O94760 285 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms