RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PPT2Q9UMR5 302 aa5.58□□□□□ -1.52
SPG11-206ENST00000558093 UBOX5O94941 541 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 NME1P15531 152 aaKnown RBP5.57□□□□□ -1.52
SPG11-206ENST00000558093 TCF3P15923 654 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 TAL1P17542 331 aaPredicted RBP5.57□□□□□ -1.52
SPG11-206ENST00000558093 ERCC5P28715 1186 aaPredicted RBP5.57□□□□□ -1.52
SPG11-206ENST00000558093 TPP2P29144 1249 aaPredicted RBP5.57□□□□□ -1.52
SPG11-206ENST00000558093 LTKP29376 864 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 RAD51AP2Q09MP3 1159 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 COL9A2Q14055 689 aaPredicted RBP5.57□□□□□ -1.52
SPG11-206ENST00000558093 SLC23A3Q6PIS1 610 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 CCDC81Q6ZN84 652 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 CREG2Q8IUH2 290 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 TGIF2Q9GZN2 237 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 MKRN2Q9H000 416 aaKnown RBP5.57□□□□□ -1.52
SPG11-206ENST00000558093 GINM1Q9NU53 330 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 EFR3BQ9Y2G0 817 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 INPP5FQ9Y2H2 1132 aa5.57□□□□□ -1.52
SPG11-206ENST00000558093 BIN1O00499 593 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 LRRN2O75325 713 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 RNASE1P07998 156 aaKnown RBP5.56□□□□□ -1.52
SPG11-206ENST00000558093 CCNFP41002 786 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 TMPRSS7Q7RTY8 843 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 LRRN4CLQ8ND94 238 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 SLC6A18Q96N87 628 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 ACBD3Q9H3P7 528 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 MBNL3Q9NUK0 354 aaKnown RBP5.56□□□□□ -1.52
SPG11-206ENST00000558093 LMCD1Q9NZU5 365 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 DUSP13Q9UII6 198 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 ADAMTS6Q9UKP5 1117 aa5.56□□□□□ -1.52
SPG11-206ENST00000558093 RBAK-RBAKDNI3L0D1 243 aa5.55□□□□□ -1.52
SPG11-206ENST00000558093 TNFRSF10CO14798 259 aa5.55□□□□□ -1.52
SPG11-206ENST00000558093 NASPP49321 788 aaPredicted RBP5.55□□□□□ -1.52
SPG11-206ENST00000558093 CPLX3Q8WVH0 158 aa5.55□□□□□ -1.52
SPG11-206ENST00000558093 SYTL4Q96C24 671 aaPredicted RBP5.55□□□□□ -1.52
SPG11-206ENST00000558093 ZNF512BQ96KM6 892 aaPredicted RBP5.55□□□□□ -1.52
SPG11-206ENST00000558093 GPR62Q9BZJ7 368 aa5.55□□□□□ -1.52
SPG11-206ENST00000558093 COL17A1Q9UMD9 1497 aaPredicted RBP5.54□□□□□ -1.52
SPG11-206ENST00000558093 GJA8P48165 433 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 EIF6P56537 245 aaKnown RBP5.54□□□□□ -1.52
SPG11-206ENST00000558093 EGR3Q06889 387 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 NMIQ13287 307 aaPredicted RBP5.54□□□□□ -1.52
SPG11-206ENST00000558093 NBPF12Q5TAG4 269 aaPredicted RBP5.54□□□□□ -1.52
SPG11-206ENST00000558093 CBLL1Q75N03 491 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 TSPYL5Q86VY4 417 aaPredicted RBP5.54□□□□□ -1.52
SPG11-206ENST00000558093 LSRQ86X29 649 aaPredicted RBP5.54□□□□□ -1.52
SPG11-206ENST00000558093 RASGRP4Q8TDF6 673 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 CCDC120Q96HB5 630 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 DHRS1Q96LJ7 313 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 ALPK1Q96QP1 1244 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 SLC9A7Q96T83 725 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 TM9SF2Q99805 663 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 SRRTQ9BXP5 876 aaKnown RBP5.54□□□□□ -1.52
SPG11-206ENST00000558093 DUSP15Q9H1R2 295 aaPredicted RBP5.54□□□□□ -1.52
SPG11-206ENST00000558093 CAPN10Q9HC96 672 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 SLAMF8Q9P0V8 285 aa5.54□□□□□ -1.52
SPG11-206ENST00000558093 WASH4PA8MWX3 477 aa5.53□□□□□ -1.52
SPG11-206ENST00000558093 E9PSI1 815 aa5.53□□□□□ -1.52
SPG11-206ENST00000558093 PAX4O43316 350 aa5.53□□□□□ -1.52
SPG11-206ENST00000558093 JUNBP17275 347 aaPredicted RBP5.53□□□□□ -1.52
SPG11-206ENST00000558093 GUCY2CP25092 1073 aa5.53□□□□□ -1.52
SPG11-206ENST00000558093 SOX9P48436 509 aa5.53□□□□□ -1.52
SPG11-206ENST00000558093 GNL2Q13823 731 aaKnown RBP5.53□□□□□ -1.52
SPG11-206ENST00000558093 FBXL21Q9UKT6 434 aa5.53□□□□□ -1.52
SPG11-206ENST00000558093 SSU72P8A0A1W2PR75 194 aa5.52□□□□□ -1.53
SPG11-206ENST00000558093 SHISA3A0PJX4 238 aa5.52□□□□□ -1.53
SPG11-206ENST00000558093 ESR1P03372 595 aa5.52□□□□□ -1.53
SPG11-206ENST00000558093 TDRD10Q5VZ19 366 aaKnown RBP5.52□□□□□ -1.53
SPG11-206ENST00000558093 INTS3Q68E01 1043 aaKnown RBP5.52□□□□□ -1.53
SPG11-206ENST00000558093 ATG4DQ86TL0 474 aaPredicted RBP5.52□□□□□ -1.53
SPG11-206ENST00000558093 TMEM192Q8IY95 271 aa5.52□□□□□ -1.53
SPG11-206ENST00000558093 CCDC144CPQ8IYA2 1237 aa5.52□□□□□ -1.53
SPG11-206ENST00000558093 ASIC4Q96FT7 647 aa5.52□□□□□ -1.53
SPG11-206ENST00000558093 PCDHB12Q9Y5F1 795 aa5.52□□□□□ -1.53
SPG11-206ENST00000558093 ACRP10323 421 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 SRFP11831 508 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 RAC2P15153 192 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 ITGB5P18084 799 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 SNW1Q13573 536 aaKnown RBP5.51□□□□□ -1.53
SPG11-206ENST00000558093 PPP2R5EQ16537 467 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 GAB4Q2WGN9 574 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 NBPF9Q3BBW0 867 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 RUFY4Q6ZNE9 571 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 TMC3Q7Z5M5 1100 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 TTC6Q86TZ1 520 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 VPS37DQ86XT2 251 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 TAB3Q8N5C8 712 aaPredicted RBP5.51□□□□□ -1.53
SPG11-206ENST00000558093 RBBP8NLQ8NC74 664 aaPredicted RBP5.51□□□□□ -1.53
SPG11-206ENST00000558093 OR6P1Q8NGX9 317 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 VWCEQ96DN2 955 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 SEC16BQ96JE7 1060 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 FAM86C1Q9NVL1 165 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 SUCOQ9UBS9 1254 aaKnown RBP5.51□□□□□ -1.53
SPG11-206ENST00000558093 TMEM59LQ9UK28 342 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 STRIP2Q9ULQ0 834 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 PCDHA11Q9Y5I1 949 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 SLC12A7Q9Y666 1083 aa5.51□□□□□ -1.53
SPG11-206ENST00000558093 MEIS1O00470 390 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 PAPLNO95428 1278 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 PRAMEF1O95521 474 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms