RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 MSCO60682 206 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 CNMDO75829 334 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 CDK8P49336 464 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 C20orf194Q5TEA3 1177 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 DPP9Q86TI2 863 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 DIS3LQ8TF46 1054 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 KANSL2Q9H9L4 492 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 BTBD7Q9P203 1132 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 TMX2Q9Y320 296 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 PLXNB2O15031 1838 aa16.35■□□□□ 0.21
SNRPA1-204ENST00000558020 TRIOBPQ9H2D6 2365 aa16.34■□□□□ 0.21
SNRPA1-204ENST00000558020 HOXC6P09630 235 aa16.34■□□□□ 0.21
SNRPA1-204ENST00000558020 ICA1Q05084 483 aa16.34■□□□□ 0.21
SNRPA1-204ENST00000558020 CCL14Q16627 93 aa16.34■□□□□ 0.21
SNRPA1-204ENST00000558020 SLC44A5Q8NCS7 719 aa16.34■□□□□ 0.21
SNRPA1-204ENST00000558020 MROH8Q9H579 483 aa16.34■□□□□ 0.21
SNRPA1-204ENST00000558020 DCTPP1Q9H773 170 aa16.34■□□□□ 0.21
SNRPA1-204ENST00000558020 SMARCA5O60264 1052 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 FLOT1O75955 427 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 ZFYP08048 801 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 AKR1B1P15121 316 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 GRB14Q14449 540 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 C7orf61Q8IZ16 206 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 SHCBP1Q8NEM2 672 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-204ENST00000558020 WDR46O15213 610 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 CNGA1P29973 690 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 CCND3P30281 292 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 DSG3P32926 999 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 EVX2Q03828 476 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 PLS1Q14651 629 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 LHX8Q68G74 356 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 GIMAP6Q6P9H5 292 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 CTR9Q6PD62 1173 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 SPICE1Q8N0Z3 855 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 KBTBD3Q8NAB2 608 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 MOV10L1Q9BXT6 1211 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 PRO3102Q9H379 93 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 GOPCQ9HD26 462 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 STAP2Q9UGK3 403 aa16.32■□□□□ 0.2
SNRPA1-204ENST00000558020 CYP2D7A0A087X1C5 515 aa16.31■□□□□ 0.2
SNRPA1-204ENST00000558020 GNAT2P19087 354 aa16.31■□□□□ 0.2
SNRPA1-204ENST00000558020 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
SNRPA1-204ENST00000558020 ABRAQ8N0Z2 381 aa16.31■□□□□ 0.2
SNRPA1-204ENST00000558020 STRBPQ96SI9 672 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-204ENST00000558020 RANBP2P49792 3224 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 RNF113AO15541 343 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 SLC25A27O95847 323 aa16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 FCER1AP12319 257 aa16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 ERCC3P19447 782 aa16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 ADORA2AP29274 412 aa16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 BMP8BP34820 402 aa16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 MNX1P50219 401 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 OLFML2BQ68BL8 750 aa16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 DDX20Q9UHI6 824 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-204ENST00000558020 MYH8P13535 1937 aa16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 ERC2O15083 957 aa16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 RAD21O60216 631 aa16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 APPP05067 770 aa16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 ARRDC4Q8NCT1 418 aa16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 NPLOC4Q8TAT6 608 aa16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 APPBP2Q92624 585 aa16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 FLRT1Q9NZU1 646 aa16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-204ENST00000558020 BAZ2AQ9UIF9 1905 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 MINDY4BA8MYZ0 360 aa16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 COL6A1P12109 1028 aa16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 CYP2C19P33261 490 aa16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 COPB2P35606 906 aa16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 KIAA1755Q5JYT7 1200 aa16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 ATG4CQ96DT6 458 aa16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 ZMYND8Q9ULU4 1186 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-204ENST00000558020 MYH7P12883 1935 aa16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 TTC41PQ6P2S7 1318 aa16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 GSG1L2A8MUP6 293 aa16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 CHGBP05060 677 aa16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 CLEC10AQ8IUN9 316 aa16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 ZNF444Q8N0Y2 327 aaPredicted RBP16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 GDF15Q99988 308 aa16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 SENP6Q9GZR1 1112 aaPredicted RBP16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
SNRPA1-204ENST00000558020 PFASO15067 1338 aa16.26■□□□□ 0.19
SNRPA1-204ENST00000558020 DNM1LO00429 736 aa16.26■□□□□ 0.19
SNRPA1-204ENST00000558020 SLC3A2P08195 630 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-204ENST00000558020 TDO2P48775 406 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms